Gene Pfl01_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3078 
Symbol 
ID3712765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3522483 
End bp3523874 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348807 
Protein GI77459300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGA TCATCGCCTT GGCAGCCCTC GCGCTGCTGA TGCTCGCGGC CTATCGTGGC 
TACAGCGTTA TCCTTTTTGC CCCGATCGCC GCCCTCGGCG CCGTCCTGCT CACCGACCCG
TCTGCCGTCG CCCCTGCTTT CACCGGGGTG TTCATGGAGA AAATGGTCGG CTTCATCAAA
CTCTACTTTC CCGTGTTCCT GCTCGGCGCC GTGTTCGGCA AGCTGATCGA GTTGTCGGGT
TTTTCCCGCT CGATCGTCGC GGCAGCGATT CGCTTGCTCG GCACCCGCCA GGCGATGCTG
GTGATCGTGC TGGTCTGCGC CCTGCTCACC TACGGCGGCG TTTCGCTGTT CGTCGTGGTG
TTCGCGGTCT ACCCGTTCGC AGCGGAAATG TTCCGCCAGA GCAACATCCC CAAGCGCCTG
ATCCCGGCGA CCATCGCCCT CGGCGCGTTC TCGTTCACCA TGGACGCCCT GCCCGGAACG
CCGCAGATCC AGAACATCAT CCCCAGCACC TTCTTCAACA CCACCGCCTG GGCGGCGCCA
TGGCTGGGTG TGATCGGCAC GATTTTCGTG TTCTGCGCCG GCATGCTGTT CCTGCAGCGC
CAGCGCAACA AGGCTCAGCG CGCGGGTGAA GGCTACGGCA CCGAACTGCG CAACGAACCG
GAAACCGCCG AAGACCTGAA ACTGCCGAAC CCATGGATCG CCCTGACGCC GCTGCTGGCG
GTGGGCATCA TGAACCTGTT GTTCACCCAG TGGATTCCGC AGTGGTACGG CAAGACCCAC
AGCCTCGCGC TGCCGGGCAT GGCCGCGCCG GTCACCACTG AAATCGCCAA ACTCACGGCG
ATCTGGGCGG TGCAGGCAGC CTTGCTGGTG GGGATTCTGA TGGTACTGGC ATTCGGTTTT
CAGGCGATTC GCAGCAAGCT TGCCGAGGGC AGCAAAAGCG CAGTCAGCGG TGCGCTGCTG
GCGGCAATGA ACACTGCTTC GGAATACGGT TTCGGCGCAG TCATCGCCTC ACTGCCAGGT
TTTCTGGTGC TGGCCGACTG GCTCAAGAGC ATCCCCAATC CGCTGGTCAA CGAAGCGATC
ACCGTGACCC TGCTGGCCGG TATCACCGGC TCTGCTTCGG GCGGCATGAG TATCGCGCTG
GCAGCGATGT CCGAACAATT CATCAGCGCC GCCCACGCCG CCAACATTCC GCTGGAAGTG
CTGCACCGGG TGGCCGCGAT GGCCAGCGGC GGCATGGACA CCCTGCCGCA CAACGGCGCG
GTGATCACCC TGCTCGCCGT CACCGGCCTG ACTCACCGTG AGGCCTACAA GGACATTTTC
TGTATTACGC TGATCAAGAC CCTGGCGGTT TTCGTGGTGA TCGGCACTTT CTACGCTACT
GGCATTGTGT GA
 
Protein sequence
MSVIIALAAL ALLMLAAYRG YSVILFAPIA ALGAVLLTDP SAVAPAFTGV FMEKMVGFIK 
LYFPVFLLGA VFGKLIELSG FSRSIVAAAI RLLGTRQAML VIVLVCALLT YGGVSLFVVV
FAVYPFAAEM FRQSNIPKRL IPATIALGAF SFTMDALPGT PQIQNIIPST FFNTTAWAAP
WLGVIGTIFV FCAGMLFLQR QRNKAQRAGE GYGTELRNEP ETAEDLKLPN PWIALTPLLA
VGIMNLLFTQ WIPQWYGKTH SLALPGMAAP VTTEIAKLTA IWAVQAALLV GILMVLAFGF
QAIRSKLAEG SKSAVSGALL AAMNTASEYG FGAVIASLPG FLVLADWLKS IPNPLVNEAI
TVTLLAGITG SASGGMSIAL AAMSEQFISA AHAANIPLEV LHRVAAMASG GMDTLPHNGA
VITLLAVTGL THREAYKDIF CITLIKTLAV FVVIGTFYAT GIV