Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3067 |
Symbol | |
ID | 3712754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3509409 |
End bp | 3510035 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_348796 |
Protein GI | 77459289 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.598248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCGATG ACCATGATCT CGTTCGTACA GGCATTACAC GTATGCTGGC CGACATCGAT GGCCTGCAGG TGGTAGGTCA GGCCGAGTCC GGGGAAGAAT CCCTCATCAA GGCTCGTGAG TTGAAGCCCG ACGTGGTGCT GATGGACGTC AAGATGCCGG GCATCGGCGG CCTCGAAGCC ACGCGCAAAC TGTTGCGAAG TCATCCCGAC ATCAAAGTGG TCGCTGTCAC TGTGTGTGAG GAAGATCCGT TTCCTACACG GTTGTTGCAG GCTGGCGCGG CGGGTTATCT GACGAAGGGT GCCGGATTGC CGGAAATGGT TCAGGCCATT CGCCTGGTGT TTGCCGGCCA GCGCTACATC AGCCCGCAAA TTGCCCAGCA ATTGGCGATC AAATCCTTCC AGCCCACCAA CGACTCACCG TTCGATGCGT TGTCGGAGCG GGAGATCCAG ATTGCGTTGA TGATTGTCGG CTGTCAGAAG GTTCAGATCA TTTCCGACAA ATTGTGCCTG TCGCCGAAAA CCGTTAACAC CTACCGCTAC CGCATATTCG AGAAGCTCTC GATCAGCAGC GATGTCGAAC TGACGCTTCT TGCGGTTCGT CACGGCATGG TTGATGCCAG CCTCTGA
|
Protein sequence | MVDDHDLVRT GITRMLADID GLQVVGQAES GEESLIKARE LKPDVVLMDV KMPGIGGLEA TRKLLRSHPD IKVVAVTVCE EDPFPTRLLQ AGAAGYLTKG AGLPEMVQAI RLVFAGQRYI SPQIAQQLAI KSFQPTNDSP FDALSEREIQ IALMIVGCQK VQIISDKLCL SPKTVNTYRY RIFEKLSISS DVELTLLAVR HGMVDASL
|
| |