Gene Pfl01_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3067 
Symbol 
ID3712754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3509409 
End bp3510035 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content57% 
IMG OID 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_348796 
Protein GI77459289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.598248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGATG ACCATGATCT CGTTCGTACA GGCATTACAC GTATGCTGGC CGACATCGAT 
GGCCTGCAGG TGGTAGGTCA GGCCGAGTCC GGGGAAGAAT CCCTCATCAA GGCTCGTGAG
TTGAAGCCCG ACGTGGTGCT GATGGACGTC AAGATGCCGG GCATCGGCGG CCTCGAAGCC
ACGCGCAAAC TGTTGCGAAG TCATCCCGAC ATCAAAGTGG TCGCTGTCAC TGTGTGTGAG
GAAGATCCGT TTCCTACACG GTTGTTGCAG GCTGGCGCGG CGGGTTATCT GACGAAGGGT
GCCGGATTGC CGGAAATGGT TCAGGCCATT CGCCTGGTGT TTGCCGGCCA GCGCTACATC
AGCCCGCAAA TTGCCCAGCA ATTGGCGATC AAATCCTTCC AGCCCACCAA CGACTCACCG
TTCGATGCGT TGTCGGAGCG GGAGATCCAG ATTGCGTTGA TGATTGTCGG CTGTCAGAAG
GTTCAGATCA TTTCCGACAA ATTGTGCCTG TCGCCGAAAA CCGTTAACAC CTACCGCTAC
CGCATATTCG AGAAGCTCTC GATCAGCAGC GATGTCGAAC TGACGCTTCT TGCGGTTCGT
CACGGCATGG TTGATGCCAG CCTCTGA
 
Protein sequence
MVDDHDLVRT GITRMLADID GLQVVGQAES GEESLIKARE LKPDVVLMDV KMPGIGGLEA 
TRKLLRSHPD IKVVAVTVCE EDPFPTRLLQ AGAAGYLTKG AGLPEMVQAI RLVFAGQRYI
SPQIAQQLAI KSFQPTNDSP FDALSEREIQ IALMIVGCQK VQIISDKLCL SPKTVNTYRY
RIFEKLSISS DVELTLLAVR HGMVDASL