Gene Pfl01_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3066 
SymboluvrC 
ID3712753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3507583 
End bp3509406 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content59% 
IMG OID 
Productexcinuclease ABC subunit C 
Protein accessionYP_348795 
Protein GI77459288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.674901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG CATTCGATTC GGGCGCCTTT CTATCGACCG TCAGCGGGCG CCCCGGCGTG 
TATCGCATGT TCGACAGCGA TGCGCGTTTG CTGTACGTCG GCAAGGCGAA GAGCCTCAAA
AAACGCCTCG CCAGCTACTT TCGCAAGACA GGCCTGGCGC CGAAAACCGC AGCACTGGTC
GGGCGTATCG CCCAGGTCGA AACCACCATC ACGTCCAACG AGACAGAGGC GTTGCTGCTC
GAGCAAACCC TCATCAAGGA GTGGCGGCCG CCGTACAACA TCCTGTTGCG CGACGATAAA
TCCTATCCCT ATGTCTTTTT GTCTGACGGG CAATTTCCGC GCCTGAGCAT TCATCGCGGG
GCCAAGAAGG CCAAGGGCAA GTATTTCGGT CCCTATCCGA GTGCCGGGGC TATTCGCGAA
AGCCTCAGCC TTTTGCAGAA GACTTTTTTC GTGCGTCAGT GCGAGGACAG TTACTACAAG
AACCGGACCC GTCCGTGCCT GCAATATCAG ATCAAGCGTT GCAAGGCGCC TTGTGTCGGA
CTCGTCGAGC CTGAGGTTTA CGCCGAGGAT GTGCGTCACT CGGTGATGTT CCTCGAAGGA
CGAAGCCATG CGTTGACCAA TGAACTGTCG ACGGCGATGG AAGAGGCTGC AATCAACCTG
GAATTCGAAC GCGCCGCCGA ACTGCGCGAC CAGATTGCCT TGCTGCGGCG GGTGCAGGAT
CAACAGAGCA TGGAAGGCGG AACGGGCGAT ATCGATGTGA TCGCCGCGTT CGTCAATCCG
GGTGGCGCCT GTGTCCATCT GATCAGCGTG CGTGGAGGGC GGGTGCTTGG CAGCAAGAAT
TTCTTCCCGC AAGTCGGGAT TGAAGAGGAA GTGGCCGAGG TCATGGCCGC TTTCCTCGGG
CAATATTTCA TCAGTAGCCC GGAGCGCGAT TTGCCGAGCG AACTGATCGT CAACGTCGTG
CACGAAGACT TCCCTGCACT GATCGAGGCC ATTCAGGCGC TGCGCGGGCG TGAATTGAGC
ATCAGTCATC GGGTGCGCGG AACACGGGCG CGCTGGCAGC AACTGGCCGT GACCAATGCC
GAACAGGCGC TGGGTGCGCG GCTGGCCAAT CGTCAGCATG TTGCCGCACG TTTCGAAGCG
CTGGCTGAAG TGTTGAACCT CGATGAGCCG CCACAACGGC TGGAGTGCTA TGACATCAGT
CACTCCAGCG GTGAAGCCAC GGTTGCGTCC TGTGTGGTGT TCGGCCCGGA AGGGGCGATC
AAGTCGGATT ACCGTCGTTA CAACATCGAA GGTGTGACCG CCGGCGACGA TTACGCCGCC
ATGCATCAGG CCCTGACCCG ACGCTTCAGC AAGCTGAAAG AAGGCGAGGG CAAACTGCCG
GACATCCTGT TGGTGGACGG CGGCAAGGGG CAGCTGTCGA TGGCGCGTGA TGTGCTCAAC
GAACTGGCGG TTCCGGATCT GATCTTGCTG GGGGTCGCGA AAGGCGCCAC GCGCAAGGCG
GGATTCGAGA CTTTGTATCT AAATGATGCG GCAAACGAGT TCACCTTGCG GGGGGATTCG
CCGGCGCTGC ACCTGATCCA GCAGATTCGT GACGAAGCCC ACCGCTTTGC AATTACAGGC
CACCGTGCAC GACGCGGCAA GACCCGCCGC ACGTCAACGC TGGAAGGTGT GGCAGGCGTC
GGGCCGACCC GGCGTCGGGA CTTGTTGAAA CATTTTGGTG GATTGCAGGA GCTGTCTCGT
GCAAGCATCG AAGAGATCGC CAAAGCACCG GGGATCAGCA AAAAGCTAGC AGAGTCGATT
TATGCAAACC TGCATAGTGA GTAG
 
Protein sequence
MTEAFDSGAF LSTVSGRPGV YRMFDSDARL LYVGKAKSLK KRLASYFRKT GLAPKTAALV 
GRIAQVETTI TSNETEALLL EQTLIKEWRP PYNILLRDDK SYPYVFLSDG QFPRLSIHRG
AKKAKGKYFG PYPSAGAIRE SLSLLQKTFF VRQCEDSYYK NRTRPCLQYQ IKRCKAPCVG
LVEPEVYAED VRHSVMFLEG RSHALTNELS TAMEEAAINL EFERAAELRD QIALLRRVQD
QQSMEGGTGD IDVIAAFVNP GGACVHLISV RGGRVLGSKN FFPQVGIEEE VAEVMAAFLG
QYFISSPERD LPSELIVNVV HEDFPALIEA IQALRGRELS ISHRVRGTRA RWQQLAVTNA
EQALGARLAN RQHVAARFEA LAEVLNLDEP PQRLECYDIS HSSGEATVAS CVVFGPEGAI
KSDYRRYNIE GVTAGDDYAA MHQALTRRFS KLKEGEGKLP DILLVDGGKG QLSMARDVLN
ELAVPDLILL GVAKGATRKA GFETLYLNDA ANEFTLRGDS PALHLIQQIR DEAHRFAITG
HRARRGKTRR TSTLEGVAGV GPTRRRDLLK HFGGLQELSR ASIEEIAKAP GISKKLAESI
YANLHSE