Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3066 |
Symbol | uvrC |
ID | 3712753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3507583 |
End bp | 3509406 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | excinuclease ABC subunit C |
Protein accession | YP_348795 |
Protein GI | 77459288 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.674901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAG CATTCGATTC GGGCGCCTTT CTATCGACCG TCAGCGGGCG CCCCGGCGTG TATCGCATGT TCGACAGCGA TGCGCGTTTG CTGTACGTCG GCAAGGCGAA GAGCCTCAAA AAACGCCTCG CCAGCTACTT TCGCAAGACA GGCCTGGCGC CGAAAACCGC AGCACTGGTC GGGCGTATCG CCCAGGTCGA AACCACCATC ACGTCCAACG AGACAGAGGC GTTGCTGCTC GAGCAAACCC TCATCAAGGA GTGGCGGCCG CCGTACAACA TCCTGTTGCG CGACGATAAA TCCTATCCCT ATGTCTTTTT GTCTGACGGG CAATTTCCGC GCCTGAGCAT TCATCGCGGG GCCAAGAAGG CCAAGGGCAA GTATTTCGGT CCCTATCCGA GTGCCGGGGC TATTCGCGAA AGCCTCAGCC TTTTGCAGAA GACTTTTTTC GTGCGTCAGT GCGAGGACAG TTACTACAAG AACCGGACCC GTCCGTGCCT GCAATATCAG ATCAAGCGTT GCAAGGCGCC TTGTGTCGGA CTCGTCGAGC CTGAGGTTTA CGCCGAGGAT GTGCGTCACT CGGTGATGTT CCTCGAAGGA CGAAGCCATG CGTTGACCAA TGAACTGTCG ACGGCGATGG AAGAGGCTGC AATCAACCTG GAATTCGAAC GCGCCGCCGA ACTGCGCGAC CAGATTGCCT TGCTGCGGCG GGTGCAGGAT CAACAGAGCA TGGAAGGCGG AACGGGCGAT ATCGATGTGA TCGCCGCGTT CGTCAATCCG GGTGGCGCCT GTGTCCATCT GATCAGCGTG CGTGGAGGGC GGGTGCTTGG CAGCAAGAAT TTCTTCCCGC AAGTCGGGAT TGAAGAGGAA GTGGCCGAGG TCATGGCCGC TTTCCTCGGG CAATATTTCA TCAGTAGCCC GGAGCGCGAT TTGCCGAGCG AACTGATCGT CAACGTCGTG CACGAAGACT TCCCTGCACT GATCGAGGCC ATTCAGGCGC TGCGCGGGCG TGAATTGAGC ATCAGTCATC GGGTGCGCGG AACACGGGCG CGCTGGCAGC AACTGGCCGT GACCAATGCC GAACAGGCGC TGGGTGCGCG GCTGGCCAAT CGTCAGCATG TTGCCGCACG TTTCGAAGCG CTGGCTGAAG TGTTGAACCT CGATGAGCCG CCACAACGGC TGGAGTGCTA TGACATCAGT CACTCCAGCG GTGAAGCCAC GGTTGCGTCC TGTGTGGTGT TCGGCCCGGA AGGGGCGATC AAGTCGGATT ACCGTCGTTA CAACATCGAA GGTGTGACCG CCGGCGACGA TTACGCCGCC ATGCATCAGG CCCTGACCCG ACGCTTCAGC AAGCTGAAAG AAGGCGAGGG CAAACTGCCG GACATCCTGT TGGTGGACGG CGGCAAGGGG CAGCTGTCGA TGGCGCGTGA TGTGCTCAAC GAACTGGCGG TTCCGGATCT GATCTTGCTG GGGGTCGCGA AAGGCGCCAC GCGCAAGGCG GGATTCGAGA CTTTGTATCT AAATGATGCG GCAAACGAGT TCACCTTGCG GGGGGATTCG CCGGCGCTGC ACCTGATCCA GCAGATTCGT GACGAAGCCC ACCGCTTTGC AATTACAGGC CACCGTGCAC GACGCGGCAA GACCCGCCGC ACGTCAACGC TGGAAGGTGT GGCAGGCGTC GGGCCGACCC GGCGTCGGGA CTTGTTGAAA CATTTTGGTG GATTGCAGGA GCTGTCTCGT GCAAGCATCG AAGAGATCGC CAAAGCACCG GGGATCAGCA AAAAGCTAGC AGAGTCGATT TATGCAAACC TGCATAGTGA GTAG
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Protein sequence | MTEAFDSGAF LSTVSGRPGV YRMFDSDARL LYVGKAKSLK KRLASYFRKT GLAPKTAALV GRIAQVETTI TSNETEALLL EQTLIKEWRP PYNILLRDDK SYPYVFLSDG QFPRLSIHRG AKKAKGKYFG PYPSAGAIRE SLSLLQKTFF VRQCEDSYYK NRTRPCLQYQ IKRCKAPCVG LVEPEVYAED VRHSVMFLEG RSHALTNELS TAMEEAAINL EFERAAELRD QIALLRRVQD QQSMEGGTGD IDVIAAFVNP GGACVHLISV RGGRVLGSKN FFPQVGIEEE VAEVMAAFLG QYFISSPERD LPSELIVNVV HEDFPALIEA IQALRGRELS ISHRVRGTRA RWQQLAVTNA EQALGARLAN RQHVAARFEA LAEVLNLDEP PQRLECYDIS HSSGEATVAS CVVFGPEGAI KSDYRRYNIE GVTAGDDYAA MHQALTRRFS KLKEGEGKLP DILLVDGGKG QLSMARDVLN ELAVPDLILL GVAKGATRKA GFETLYLNDA ANEFTLRGDS PALHLIQQIR DEAHRFAITG HRARRGKTRR TSTLEGVAGV GPTRRRDLLK HFGGLQELSR ASIEEIAKAP GISKKLAESI YANLHSE
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