Gene Pfl01_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3055 
Symbol 
ID3712739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3496934 
End bp3497779 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content65% 
IMG OID 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_348784 
Protein GI77459277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00610584 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAGTTCG AACACGTCAC TTTCGACCTG CCACACGGAA CCTTTCATGC GCTGAAGGGC 
GGCGATCCCG ATGGTCAACC GACGATCGTC TTGCACGGTT TCCCAGATCA TCCGCCGACC
GCGAAGATCT TCCTTGCCGA GCTCGGCCGC CGCGGCCGTC ACGTCGTCGC ACCCTGGCTA
CGCGGTTACG CGCCTTCCCC GACTGCGGGG CCGTTCAACT TCGCGGCTCT CACCAGCGAC
GTGCTCGCGC TGATCGACCG TTGGTCTCCG GAGCGCCCCG TGGAGTTGAT TGGTCACGAT
TGGGGCGCCC TGATCACCTA TGATGCCTGC GTCACCGCAC CGGAGCGGAT CGAACGCGCA
GTCGCGCTCG CAATCCCTCA CCCACTCACG TTCATGAGCC GGCTGACGCA CCTCCCTCAG
CTACGCCGGA GCTGGTACAT GGGGCTCTTT CAACTGCCTG GAAGCGGCTG GATCGCCACC
GCCCGCGATC TTGCCTTCAT CGACAGCCTC TGGCGTCGAT GGTCGCCCGG TTTCTCGCTC
GATCCCGCTC TCAAGGCAGA GCTACATGAG CATCTGCGCC AGAGCATGCC TGCGCCCCTA
AAGTATTACC GGGCGATGCT GCGCCCCGGC ATGATTGGTG CGACGCGCCG TATGTCTCAG
CCGATCACGG TGCCCCTGTT GCAGCTTCAC GGCGCCAACG ACGACTGCAT CCTCCCCGCG
CATGTCGAAG ACAGGCATCG GTTCGCCGCC CCGCACGCGA TGGAAGTCGT CCCCGGCGTC
GGTCACTTCC TGCACGTCGA GGCCCCTGAA GCGATCGCGG AACGGATCGC GGCATGGGCC
AAGTAG
 
Protein sequence
MEFEHVTFDL PHGTFHALKG GDPDGQPTIV LHGFPDHPPT AKIFLAELGR RGRHVVAPWL 
RGYAPSPTAG PFNFAALTSD VLALIDRWSP ERPVELIGHD WGALITYDAC VTAPERIERA
VALAIPHPLT FMSRLTHLPQ LRRSWYMGLF QLPGSGWIAT ARDLAFIDSL WRRWSPGFSL
DPALKAELHE HLRQSMPAPL KYYRAMLRPG MIGATRRMSQ PITVPLLQLH GANDDCILPA
HVEDRHRFAA PHAMEVVPGV GHFLHVEAPE AIAERIAAWA K