Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3043 |
Symbol | |
ID | 3712727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3483713 |
End bp | 3484462 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | pili assembly chaperone |
Protein accession | YP_348772 |
Protein GI | 77459265 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000936481 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.260101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTTAC GGCATTTCTT ATCCCTGTGC GTCGGCCTCT TGGGTCTGTT CGCCGTTAAT CAGGCCATGG CCGGTATTTC GTTGAGCAGC ACCCGGCTGA TTTTCGATGG CAAGCATAAA GAAGCCAGCA TCACCGTGCG CAATAGCGGT GCAGACGTAT TGGTTCAGTC CTGGGTCGAC ACAGACAGCG ACGAAGCAGG TTCAGCGCCC TTCGCCGTCA CCCCGCCTCT GGTGCGGGTC AGCGGCGATC AACAGCAGAT TCTGCGGGTT ATCTACGAAG GCACCGGTAT GCCGAGCGAC CGCGAGTCGG TGGTGTGGCT GAATGTGCAG GAAATCCCCC AATCGGCGAA AACCGCGAAC ACCCTGCAAC TGGCGGTACG TCAGCGGATC AAGGTGTTCT TTCGCCCCGC CGGTTTGCCA AACAATGCCT ATCAAGCGCC AACCGAGCTG CGCTGGCGAC TGATCGAGCG CGCCGGCAAG AGCGTGCTGG TGGTGAACAA TCCAGGCCTC TATCACGTAT CGATTGCCGA CATAACGATG CAAGCGGGCG CCAGCAGCGA GAAGCCATTC GATTCGATGA TGATTGCGCC CGGCGAACAC AAAGAATTCG TGCTCAAACA AACTCACGCG GCCAGTTCTG CGCGACTGTC ATTCAGCAGC ATCAACGACT ACGGCGCCCG AGACCGTTAT GTCGCGCAAC TTTCCGGCAG CGCCGAAGTT AGCGCCAGCC TGGATAAAGA ATCGCCATAA
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Protein sequence | MFLRHFLSLC VGLLGLFAVN QAMAGISLSS TRLIFDGKHK EASITVRNSG ADVLVQSWVD TDSDEAGSAP FAVTPPLVRV SGDQQQILRV IYEGTGMPSD RESVVWLNVQ EIPQSAKTAN TLQLAVRQRI KVFFRPAGLP NNAYQAPTEL RWRLIERAGK SVLVVNNPGL YHVSIADITM QAGASSEKPF DSMMIAPGEH KEFVLKQTHA ASSARLSFSS INDYGARDRY VAQLSGSAEV SASLDKESP
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