Gene Pfl01_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3043 
Symbol 
ID3712727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3483713 
End bp3484462 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content58% 
IMG OID 
Productpili assembly chaperone 
Protein accessionYP_348772 
Protein GI77459265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000936481 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.260101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTAC GGCATTTCTT ATCCCTGTGC GTCGGCCTCT TGGGTCTGTT CGCCGTTAAT 
CAGGCCATGG CCGGTATTTC GTTGAGCAGC ACCCGGCTGA TTTTCGATGG CAAGCATAAA
GAAGCCAGCA TCACCGTGCG CAATAGCGGT GCAGACGTAT TGGTTCAGTC CTGGGTCGAC
ACAGACAGCG ACGAAGCAGG TTCAGCGCCC TTCGCCGTCA CCCCGCCTCT GGTGCGGGTC
AGCGGCGATC AACAGCAGAT TCTGCGGGTT ATCTACGAAG GCACCGGTAT GCCGAGCGAC
CGCGAGTCGG TGGTGTGGCT GAATGTGCAG GAAATCCCCC AATCGGCGAA AACCGCGAAC
ACCCTGCAAC TGGCGGTACG TCAGCGGATC AAGGTGTTCT TTCGCCCCGC CGGTTTGCCA
AACAATGCCT ATCAAGCGCC AACCGAGCTG CGCTGGCGAC TGATCGAGCG CGCCGGCAAG
AGCGTGCTGG TGGTGAACAA TCCAGGCCTC TATCACGTAT CGATTGCCGA CATAACGATG
CAAGCGGGCG CCAGCAGCGA GAAGCCATTC GATTCGATGA TGATTGCGCC CGGCGAACAC
AAAGAATTCG TGCTCAAACA AACTCACGCG GCCAGTTCTG CGCGACTGTC ATTCAGCAGC
ATCAACGACT ACGGCGCCCG AGACCGTTAT GTCGCGCAAC TTTCCGGCAG CGCCGAAGTT
AGCGCCAGCC TGGATAAAGA ATCGCCATAA
 
Protein sequence
MFLRHFLSLC VGLLGLFAVN QAMAGISLSS TRLIFDGKHK EASITVRNSG ADVLVQSWVD 
TDSDEAGSAP FAVTPPLVRV SGDQQQILRV IYEGTGMPSD RESVVWLNVQ EIPQSAKTAN
TLQLAVRQRI KVFFRPAGLP NNAYQAPTEL RWRLIERAGK SVLVVNNPGL YHVSIADITM
QAGASSEKPF DSMMIAPGEH KEFVLKQTHA ASSARLSFSS INDYGARDRY VAQLSGSAEV
SASLDKESP