Gene Pfl01_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2970 
Symbol 
ID3712341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3407543 
End bp3409681 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content56% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_348701 
Protein GI77459195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTG CGCGTGTATC CATCAAGTGG AAAATCACAC TGTTGGCAGG ATTTTGCCTG 
CTGTGTACCG TCGTACTGTT GGTGGGTACG TCCCTGTATC GCATGGACAC CAGTCTGGCA
TTGGTCAAAT CAGCCAACTC ACAGATGCTT GAGGCGGCAG CCCGGGCCCG CATGGAGGCT
CGCGGCGAGC AGCAGGCTGA GACTACTCAG CGCTTTTTTT CGGACATCTC TAACTATGGC
AACCAGTTCA CTCGACAAGT CCAACAGCTT CGAGACCAAG CAACTAAGCA TGGCGCCGAT
CCCCAAGAGC TGCGCAAGGA TCTGAATCAA CTGGTACACG ACGGCCTGAA AGCCAATCCT
TCGCTACTGA GCTTGTACGT GGTGTTCGCC CCTGATGCAT TGGACGGCCA GGATGCGCGC
TTTGCCGATG AATCTACCTC GGGCAGTAAC GAGAAAGGCC GATTTGCTTC TTACTGGAGC
CAGAAGGATT CGACAGACAG TTACATGGCG GTGCCTGAGA AAATCATCGC CGATACAACC
CCTATGTTGG ACGGTACTCC GTTCAATACC TGGTATAGCT GCCCACAGCA AACCCTCAGG
CCTTGCGTGC TCAATCCTTA TTTTGACGAC ACGTCTGGCC AGCCTTTACT GATGACAACT
CTTGCTTTTC CATTGATCGA AAATGGCAAA GTCATTGCGG TCATCGGCGC GGATATCAGC
CTGAGTCGAT TGCAGCAGCT AAGTCTGGAT GGCAGCCTGC AACTCTATGA GGGTAGGGGG
ACATTGCGAA TCGTCAGTTC CGCTGGATTG GTTGCGGGCG ATAGCCATAA TCCAGGTTCA
CTCGGTCGTA CACTCGAAAG CGTTCAGAAG GATGGTGCTG ACCTACTGGC GATGTTGAGC
TCAGGTAAGT CTCAGTCCTT GGATACGCTC ACGAGCCTGC GCATTTTGGA GCCGCTGAAG
GTGATTCCTG AGGGGAAACC TTGGGGATTG GTTTTAGAGG TTCCGCGAGC AATCCTGCTG
GAACCGGCGC TTGCGCTGCA TCAGGAACTT GATGAGCGAA GCCTGTCCGG TGCGCTATGG
GAAACAGGGC TTGCGGGAGG CGTGGCGCTG CTAGGTCTGA TCGTGCTGTG GTTGACTGCT
CGCGGCGTCA GCATGCCAAT CCTTAGCGTG GCCAACATGC TTCGGGATAT CGCCAGCGGT
GAGGGTGATC TCACCAAACG TTTGGATTAT CAAGGCAGCG ATGAACTGGG TCAGTTAGCA
GGTTGGTTTA ATCGCTTTCT AGACAAACTC CACCCGATAA TCCGGGACGT GAAAGCGTCC
GTGCATGATG CCCGCGCAAC CGCAGATCAG TCAGCGACAT TGTCTGAGCA AACCAGTACA
GGGATGGAGC ACCAGTTCAG GGAAATCGAA CAGGTGGCCA CCGCGTCGCA GGAAATGAGT
GCAACGGCCC ATGATGTGGC CACTAGCGCG GCCCAGGCTG CGCAAGCGGC TCGTGGTGCA
GAGCAGGCGA GCTCGGATGG CCTGGCGGTG ATACAACAAA CTACGCATTT GATTGATGGC
TTGGCCAAAG ACATGAGTCT TGCGGTAAGA GAGGTCGAAG GTTTGGCGGC CAGCAGCAGC
AAGATTGGTT CTGTGCTGGA CGTCATACGA GCGATCGCCG AGCAAACCAA TCTGTTGGCC
CTGAACGCGG CCATTGAGGC TGCGCGGGCC GGTGATGCGG GTCGGGGATT TGCGGTTGTG
GCCGACGAAG TGAGGGGGCT GGCGAAACGA ACCCAGGATT CGGTCGAAGA GGTCCGCCAG
GTGATCGAGA CGTTGCAGCG CGGTACGAGT GAGGTGGTCA ACGCGATGAA CAATAGCCAC
CATCAGGCCC AGGGGAGCGC GGGGCAGGTC GTGCAAGCCG TGACGGCACT GCAGCGTATC
AGCGGCGCGG TTTCCATCAT CAATGACATG AACCTGCAGA TCGCCAGCGC GGCCGAGGAG
CAGAGTGTGG TGGCGGAGGA GGTGAATCGA AATGTGGCAT CGATTCGTGA TGTCACCGAG
TCGCTGTCTG ATCAATCAAA AAAATCTGCT CAGATCAGTC AGTCCTTGAA CCATCTGGCC
AATCATCAGC AGCAGTTGAT GGCGCAGTTC AAAGTCTGA
 
Protein sequence
MRFARVSIKW KITLLAGFCL LCTVVLLVGT SLYRMDTSLA LVKSANSQML EAAARARMEA 
RGEQQAETTQ RFFSDISNYG NQFTRQVQQL RDQATKHGAD PQELRKDLNQ LVHDGLKANP
SLLSLYVVFA PDALDGQDAR FADESTSGSN EKGRFASYWS QKDSTDSYMA VPEKIIADTT
PMLDGTPFNT WYSCPQQTLR PCVLNPYFDD TSGQPLLMTT LAFPLIENGK VIAVIGADIS
LSRLQQLSLD GSLQLYEGRG TLRIVSSAGL VAGDSHNPGS LGRTLESVQK DGADLLAMLS
SGKSQSLDTL TSLRILEPLK VIPEGKPWGL VLEVPRAILL EPALALHQEL DERSLSGALW
ETGLAGGVAL LGLIVLWLTA RGVSMPILSV ANMLRDIASG EGDLTKRLDY QGSDELGQLA
GWFNRFLDKL HPIIRDVKAS VHDARATADQ SATLSEQTST GMEHQFREIE QVATASQEMS
ATAHDVATSA AQAAQAARGA EQASSDGLAV IQQTTHLIDG LAKDMSLAVR EVEGLAASSS
KIGSVLDVIR AIAEQTNLLA LNAAIEAARA GDAGRGFAVV ADEVRGLAKR TQDSVEEVRQ
VIETLQRGTS EVVNAMNNSH HQAQGSAGQV VQAVTALQRI SGAVSIINDM NLQIASAAEE
QSVVAEEVNR NVASIRDVTE SLSDQSKKSA QISQSLNHLA NHQQQLMAQF KV