Gene Pfl01_2925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2925 
Symbol 
ID3712689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3370854 
End bp3371417 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_348656 
Protein GI77459150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.333521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCA TCAACAGCCA AGTAAAACCG TTCAAAGCTA CCGCGTTCAA AAACGGCGAC 
TTCGTACAAG TCTCGGACGC TGACCTGAAA GGCAAATGGT CCGTAGTGTT TTTCTACCCG
GCCGACTTCA CTTTCGTTTG CCCAACCGAA CTCGAAGACC TGGCTGACAA CTACGCCGCC
TTCCAGAAAC TGGGCGTAGA GATCTACAGC GTTTCGACCG ACACCCACTT TGCTCACGCT
GCCTGGCACA ACACTTCGCC AGCCATCGGC AAAATCCAGT ACACCATGAT CGGCGACCCG
ACTCAGGTCA TCTCCCGCAA CTTCGACGTG CTGATCGAAG AAGCTGGCCT GGCTGACCGT
GGCACCTTCG TGATCAACCC TGAAGGCCAG ATCAAAATCG TTGAACTGAA CGATGGCGGC
GTTGGCCGTG ACGCATCCGA GCTGCTGCGC AAAATCAAGG CTGCTCAGTA CGTCGCTGCC
CACCCAGGCG AAGTTTGCCC GGCCAAATGG AAAGAAGGCG AGGCCACGCT GGCTCCGTCC
CTGGACCTGG TCGGCAAGAT CTAA
 
Protein sequence
MPIINSQVKP FKATAFKNGD FVQVSDADLK GKWSVVFFYP ADFTFVCPTE LEDLADNYAA 
FQKLGVEIYS VSTDTHFAHA AWHNTSPAIG KIQYTMIGDP TQVISRNFDV LIEEAGLADR
GTFVINPEGQ IKIVELNDGG VGRDASELLR KIKAAQYVAA HPGEVCPAKW KEGEATLAPS
LDLVGKI