Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2925 |
Symbol | |
ID | 3712689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3370854 |
End bp | 3371417 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_348656 |
Protein GI | 77459150 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.333521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATCA TCAACAGCCA AGTAAAACCG TTCAAAGCTA CCGCGTTCAA AAACGGCGAC TTCGTACAAG TCTCGGACGC TGACCTGAAA GGCAAATGGT CCGTAGTGTT TTTCTACCCG GCCGACTTCA CTTTCGTTTG CCCAACCGAA CTCGAAGACC TGGCTGACAA CTACGCCGCC TTCCAGAAAC TGGGCGTAGA GATCTACAGC GTTTCGACCG ACACCCACTT TGCTCACGCT GCCTGGCACA ACACTTCGCC AGCCATCGGC AAAATCCAGT ACACCATGAT CGGCGACCCG ACTCAGGTCA TCTCCCGCAA CTTCGACGTG CTGATCGAAG AAGCTGGCCT GGCTGACCGT GGCACCTTCG TGATCAACCC TGAAGGCCAG ATCAAAATCG TTGAACTGAA CGATGGCGGC GTTGGCCGTG ACGCATCCGA GCTGCTGCGC AAAATCAAGG CTGCTCAGTA CGTCGCTGCC CACCCAGGCG AAGTTTGCCC GGCCAAATGG AAAGAAGGCG AGGCCACGCT GGCTCCGTCC CTGGACCTGG TCGGCAAGAT CTAA
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Protein sequence | MPIINSQVKP FKATAFKNGD FVQVSDADLK GKWSVVFFYP ADFTFVCPTE LEDLADNYAA FQKLGVEIYS VSTDTHFAHA AWHNTSPAIG KIQYTMIGDP TQVISRNFDV LIEEAGLADR GTFVINPEGQ IKIVELNDGG VGRDASELLR KIKAAQYVAA HPGEVCPAKW KEGEATLAPS LDLVGKI
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