| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2920 |
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| Symbol | |
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| ID | 3712684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3365555 |
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| End bp | 3367090 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_348651 |
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| Protein GI | 77459145 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0937134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.688785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTGA CCGTCAGGCC CCGCCGCAAG CGCAGCACCC GGATTATCGT GACATTGCTG
TGCGGCTTGC TGCCGATCGT ACTCGGCAGT GCCATTCTTT ATATGCAGGC CGGACGCGCC
CTCCAGCAGA GTTCGCAACA CACCGCCGAA GAAGCCCTGC GTCAGTTCGA ACTGATGCTC
GACAACACTG CCCAGGCCGC CCGCGAACTG TTGCCTTTGG CCGGCCAGAC CTGCGAGACC
GTCAAACTGG CCTTGCGCGA ACAAGTCACC CGCCGCCCGT TCGTGCGCTC GACCAATCTG
GTGTGGGACG ACAATCTCTA TTGCAGCTCC TTGTTCGGCA ATTTCAAGGA AGCCGTCAAT
CCAGGCGACT ACGCCCAAGG CAAGTTGTGG CTCATGAACG GCAACCCGGT GACGCCTGAC
ACCGCGCTGC TGGTGTACCG CCTCAGCGAA GGCCGTGGTG GCGCACTGAC CACGCTGGAC
GGCTATCACC TGAGCAACAT CCTGCGCCTG ATCGGCCGGC ACACATTGTT GTTGCTGCAA
GTCGGCAACA ACTGGCTCTG CGCCGACGGC AAAGTGCATC AAGGCGCCTT GCCCGCGTTG
CCGGTGGCGC AAAGTACCTT GCACTCGTCG CACTATGCGT TCTCGGTGAC AGCCGCTTTT
CCAGAAGGCG AAACCTGGCG CTACATGAAA GATGAATACC CGCCGCTGTT CAGCCTGCTG
ATGTTCTTCG GTGCAGTATC GGGAGCAATC GGTTACATCG TGCAAAAACG ATCCACGTCG
CCCAGCCATG AAATGCTTCG GGCGCTGGAG GCGGGAGAGT TCATTCCCTA CTTTCAACCG
GTGGTGCACG GCGACAGTAA ACAGTGGTCG GGCACGGAAG TGCTGATGCG CTGGAACCAT
CCCAAGGAGG GGCTGGTGCG TCCGGACCTG TTCATCCCGT TTGCCGAACA CTCCGGACTG
ATCGTGCCGA TGACCCGGGC CTTGATGCAG CAGACGGCTG TCGTGCTGGG GCCGCTGTCA
TCGACCTATA CCGCGCCTTT CCACATTGGC ATCAACATCA CCGCCAGCCA TTGCAACGAT
CTGGAGCTGG TTGAGGATTG CCGTGAATTT TTGTCAGCTT TTCAGCCGGG CAGCATCAGC
CTGGTTCTGG AACTCACCGA ACGTGAGCTG ATCGAGCCGT CCGACATTAC CCATCAACTG
TTCGCGCAGC TGCGTGCAAT GGGCGTGAAG ATCGCGATTG ACGACTTTGG CACCGGCCAT
TCAAGCCTCG GTTACTTGAG GACGTTCAAT GTCGACTTCC TCAAGATCGA TCAGACATTT
GTCGCCATGA TCGATAAAGA TGCGCTGTCA CGGCATATTC TGGACAGCAT CATCGAGCTC
TCGACCAAGC TGGATCTGGG CATCGTGGCC GAAGGTGTGG AGACGCAAGC CCAGTGTGAT
TATCTGGCCG CCCACCATGT CAACTTTCTG CAGGGCTACC TTTTCGGCAA ACCGATGCCG
GCTGCAGACT TCATCGAAGC ATTAACTCAT CATTAA
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| Protein sequence | MPLTVRPRRK RSTRIIVTLL CGLLPIVLGS AILYMQAGRA LQQSSQHTAE EALRQFELML
DNTAQAAREL LPLAGQTCET VKLALREQVT RRPFVRSTNL VWDDNLYCSS LFGNFKEAVN
PGDYAQGKLW LMNGNPVTPD TALLVYRLSE GRGGALTTLD GYHLSNILRL IGRHTLLLLQ
VGNNWLCADG KVHQGALPAL PVAQSTLHSS HYAFSVTAAF PEGETWRYMK DEYPPLFSLL
MFFGAVSGAI GYIVQKRSTS PSHEMLRALE AGEFIPYFQP VVHGDSKQWS GTEVLMRWNH
PKEGLVRPDL FIPFAEHSGL IVPMTRALMQ QTAVVLGPLS STYTAPFHIG INITASHCND
LELVEDCREF LSAFQPGSIS LVLELTEREL IEPSDITHQL FAQLRAMGVK IAIDDFGTGH
SSLGYLRTFN VDFLKIDQTF VAMIDKDALS RHILDSIIEL STKLDLGIVA EGVETQAQCD
YLAAHHVNFL QGYLFGKPMP AADFIEALTH H
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