Gene Pfl01_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2917 
Symbol 
ID3712681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3362228 
End bp3363304 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_348648 
Protein GI77459142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.433802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.723827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATT TATACGAAAA CCCAATGGGC CTGATGGGCT TCGAGTTCAT CGAGTTCGCA 
TCGCCCACAC CTGGCACCCT GGAGCCGATC TTCGAGATCA TGGGCTTCAC CAAGGTCGCG
ACACACCGTT CCAAGAACGT GCACCTGTAC CGCCAGGGCG CGATCAACCT GATCCTCAAC
AACGAACCCC ACAGCGTGGC CTCGTACTTC GCGGCCGAGC ACGGTCCATC CGTTTGCGGC
ATGGCGTTCC GGGTCAAGGA TTCGCAGAAG GCTTACAAAC GCGCGTTGGA ACTCGGTGCC
CAGCCAATCC ACATCGAAAC CGGCCCGATG GAACTGAACC TGCCGGCGAT CAAAGGCATT
GGCGGCGCGC CGCTGTACCT GATCGACCGT TTTGGTGAAG GCAGCTCGAT CTATGACATC
GACTTCGTGT TCCTCGAAGG CGTTGACCGC AACCCGGTCG GTGCCGGCCT GAAGATCATC
GACCACCTGA CCCACAACGT GTATCGCGGT CGCATGGCCT ACTGGGCGAA CTTCTACGAG
AAACTGTTCA ACTTCCGCGA AATCCGTTAC TTCGATATCA AGGGCGAATA CACCGGCCTG
ACCTCGAAAG CGATGACCGC GCCGGACGGC ATGATCCGCA TCCCGCTCAA CGAGGAATCA
TCGAAGGGCG CCGGGCAGAT CGAAGAGTTC CTGATGCAGT TCAATGGCGA AGGCATCCAG
CACGTGGCGT TCCTCACTGA CGACCTGGTC AAGACCTGGG ATCAGCTGAA GAAGATCGGC
ATGCGCTTCA TGACCGCGCC GCCGGATACC TACTACGAAA TGCTCGAAGG CCGCCTGCCG
AACCACGGCG AGCCGGTCGA TCAGTTGCAA TCGCGCGGCA TCCTGCTGGA TGGTGCGTCG
GATAAGGAAG ACAAGCGTCT GCTGCTGCAG ATCTTCTCGG AAACCCTGAT GGGGCCGGTG
TTCTTCGAAT TCATCCAGCG CAAAGGCGAC GATGGTTTCG GCGAAGGCAA CTTCAAGGCT
CTGTTCGAAT CGATCGAGCG TGACCAGGTG CGTCGTGGCG TACTCGCTAC CGAGTAA
 
Protein sequence
MADLYENPMG LMGFEFIEFA SPTPGTLEPI FEIMGFTKVA THRSKNVHLY RQGAINLILN 
NEPHSVASYF AAEHGPSVCG MAFRVKDSQK AYKRALELGA QPIHIETGPM ELNLPAIKGI
GGAPLYLIDR FGEGSSIYDI DFVFLEGVDR NPVGAGLKII DHLTHNVYRG RMAYWANFYE
KLFNFREIRY FDIKGEYTGL TSKAMTAPDG MIRIPLNEES SKGAGQIEEF LMQFNGEGIQ
HVAFLTDDLV KTWDQLKKIG MRFMTAPPDT YYEMLEGRLP NHGEPVDQLQ SRGILLDGAS
DKEDKRLLLQ IFSETLMGPV FFEFIQRKGD DGFGEGNFKA LFESIERDQV RRGVLATE