Gene Pfl01_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2904 
Symbol 
ID3712668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3348396 
End bp3349364 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_348635 
Protein GI77459129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.127948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.437395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC AGGTTGTGTT GTACAAGAAA CTGTCGCCGG CGCTGATGGC GCGCCTTGAG 
GAACAGGTCG ATGTGACGCT GATCGACAGC CTCGACGCCG ACGGCCTGAT GAAACTGCGC
GACGCCCTCC CCGGTGCCCA CGGCCTGCTC GGTGCGAGCC TGAAACTGGA CGCGGCGCTG
CTCGATCTGG CGCCGAACCT TGAAGCGATT TCCAGCGTCT CGGTGGGTGT CGACAACTAC
GACATCGACT ACCTGACCCA ACGCAAGGTC ATGCTGACCA ACACCCCGGA CGTGCTCACC
GAAACCACCG CCGACACCGG TTTCGCACTG ATCCTGGCCA CCGCCCGGCG CGTGGTTGAG
CTGGCGAACA TGGTGCGCGG CGGCCACTGG CACCGCAGCA TCGGCCCGGC GCATTTCGGT
ACCGATGTGC ACGGCAAGAC CCTGGGCATC ATCGGTATGG GGCGGATCGG TGAGGCGCTG
GCCCAGCGTG GACATTTCGG GTTCGGGATG CCGGTGATCT ATCACAGCCA GTCGCGCAAA
CCGGCGGTTG AAGAACGTTT CGATGCACAG TACCGCAGCC TTGAAGACTT GTTGCAGCAG
GCGGATTTCA TCTGCCTGAC ATTGCCGCTG ACGGCGCAGA CTGAAGGTCT GATTGGCGCC
GAACAGTTTG CGTTGATGCG ACCGGAGAGC ATCTTCATCA ACATTTCACG AGGCAAAGTT
GTGGATGAGG CCGCGCTGAT CGACACCTTG CGCCATAACC GGATTCGCGC GGCGGGGCTG
GATGTGTTCG AGCGTGAACC GTTGAATCAT GACTCGCCGT TGTTGCAGTT GAACAACGTG
GTGGCGACGC CGCACATGGG CTCGGCAACC CATGAAACGC GCGAAGCGAT GGCGCGGTGT
GCGGTGGAGA ATCTGTTGGC GGCGCTGGCG GGACAAAGGC CCGCCAATCT GGTGAATCCC
CCACTCTGA
 
Protein sequence
MKKQVVLYKK LSPALMARLE EQVDVTLIDS LDADGLMKLR DALPGAHGLL GASLKLDAAL 
LDLAPNLEAI SSVSVGVDNY DIDYLTQRKV MLTNTPDVLT ETTADTGFAL ILATARRVVE
LANMVRGGHW HRSIGPAHFG TDVHGKTLGI IGMGRIGEAL AQRGHFGFGM PVIYHSQSRK
PAVEERFDAQ YRSLEDLLQQ ADFICLTLPL TAQTEGLIGA EQFALMRPES IFINISRGKV
VDEAALIDTL RHNRIRAAGL DVFEREPLNH DSPLLQLNNV VATPHMGSAT HETREAMARC
AVENLLAALA GQRPANLVNP PL