Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2880 |
Symbol | |
ID | 3712428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3321774 |
End bp | 3322553 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348611 |
Protein GI | 77459105 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.460718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.236104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTTCG AACTCAGCGT TGACCTCACC ACCCTGGCCG TTCTGGCCCT TGTCGCTTTC ATTGCCGGAT TCATCGACGC CATCGCCGGC GGTGGCGGTC TGTTGACCAC ACCGGCGCTG CTCACTGCCG GCCTGCCGCC GCACCTGGTG CTGGGCACTA ATAAACTGAG TTCGACCTTC GGCTCGGCAA CCGCCAGTTT CACCTTCTAC CGACGCAAGC TGTTCCATCC CAAGCAGTGG ATGCACGCCA TCGTCGGCAC GCTGGTCGGT GCGCTGACCG GCGCCATCGT CGCCCATTAC CTGCCCGCCG AATGGCTGAA CAAGATGCTG CCGGTGATCG TCTTCGCCTG TGGCCTGTAC CTGTTGTTTG GCGGCACGCC GAAAGCGCCG TTGGACAGCG ATGCACCGAT CAAAAAGAAG TGGCAATCGA CCCAGGGCTT CAGCCTCGGT TTCTACGACG GCGTGGCCGG CCCCGGCACT GGCGCGTTCT GGACTGTCAG CAGTCTGCTG CTGTACCCGA TCGATCTGGT CAAGGCCAGC GGCGTGGCGC GCAGCATGAA CTTCGTCAGC AACATTGCGG CGCTGTCGGT GTTCGTGTTT TCCGGGCAGG TGGACTGGAT CATCGGCCTG AGCATGGGCC TGTCGGTGAT GGTCGGCGCG TTCTTCGGGG CGCGCACCGC GATCAGCGGC GGCGCCAAGT TCATTCGTCC GGTGTTCATC ACCGTGGTGC TGGGGTTGAC CGTGCGCCTA GCCTGGCAGC ACTGGTTCAG CGTGGCCTAA
|
Protein sequence | MPFELSVDLT TLAVLALVAF IAGFIDAIAG GGGLLTTPAL LTAGLPPHLV LGTNKLSSTF GSATASFTFY RRKLFHPKQW MHAIVGTLVG ALTGAIVAHY LPAEWLNKML PVIVFACGLY LLFGGTPKAP LDSDAPIKKK WQSTQGFSLG FYDGVAGPGT GAFWTVSSLL LYPIDLVKAS GVARSMNFVS NIAALSVFVF SGQVDWIIGL SMGLSVMVGA FFGARTAISG GAKFIRPVFI TVVLGLTVRL AWQHWFSVA
|
| |