Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2851 |
Symbol | |
ID | 3712171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3288836 |
End bp | 3289801 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_348582 |
Protein GI | 77459076 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCC CACTTTCCAA TTCCGGAAAC CCACCGGTCA AAACCGCTCA CCGGGCACCG TTGGCCCTCA GCGGACTGGA TTTCAAACTG CTCAAGGTGT TCAAGGCGGT AGTCGAGGCC GGCGGCTTCA GCGCGGCGCA AAACGAGCTG AACGTGGGCC TGGCCGCGAT CAGCAAGCAG ATATCCGACC TCGAAATCCG CATCGGCATG CGCCTGTGCA CCCGGGGGCG CGAAGGGTTT CACCTGACCG AGGAAGGGCG TCTGGTGTAT CAGGCGTCGA TTGATCTGTT TGCCTCGGTC GACAACTTTC GTGACCGGCT TAGTTCTGCG CAGAACGAAC TTATCGGCGA TCTCGGAGTG GGGGTGATCG ACAATACGAT TAGCGATGAT AATTCACCGT TAGTTGCCGC GCTTAGAAAG ATAAATGAAC ATTCTCCGAA AGTAAGGTTT CAACTTCAGT CGACCCAATT GGATGAAGTG GAAAGAGGCG TGGTGGAAGG TCGCTTAGTT GCCGGAATAG TCCCGGTATA TCAGAAACGC GAAGAGTTCG ATTATTACCC GCTCTATGAA GAACGCTCGC AGGCTTACTG CGCGGTCGGC CACCCGTTGT TCGAGATGCC GGCGGAGCAG ATGGGCGGTA ACGTGCTGCA GGATTACGAG TGCATCAACC ACCGCTACGC GATCCATCGC GACAAGCTCA ACTTCGCCCG CTACGACAGT TTTTCCGCCT CGGCGACCCA GGTCGAAGCG GTCGCGTTGC TGATCAAGAC CGGGCGTTTC GTGGGCTTTC TGCCGCAGCA TTACGCCGCC GCGCTGGTGG CCGCCGGGCA GTTCCGCGCG GTGTGCCCGG AGCTGATCCA CTTCGACACG CCATTCAATC TGATCCTGCG CCACAACACC GTGCGCAGTC CGCTGGTCAA GGCGTTTGCC CAGGCGCTGG GGGTTGATCT CAAGGCGACG GCGTGA
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Protein sequence | METPLSNSGN PPVKTAHRAP LALSGLDFKL LKVFKAVVEA GGFSAAQNEL NVGLAAISKQ ISDLEIRIGM RLCTRGREGF HLTEEGRLVY QASIDLFASV DNFRDRLSSA QNELIGDLGV GVIDNTISDD NSPLVAALRK INEHSPKVRF QLQSTQLDEV ERGVVEGRLV AGIVPVYQKR EEFDYYPLYE ERSQAYCAVG HPLFEMPAEQ MGGNVLQDYE CINHRYAIHR DKLNFARYDS FSASATQVEA VALLIKTGRF VGFLPQHYAA ALVAAGQFRA VCPELIHFDT PFNLILRHNT VRSPLVKAFA QALGVDLKAT A
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