Gene Pfl01_2841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2841 
Symbol 
ID3712605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3277878 
End bp3279026 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content63% 
IMG OID 
ProductUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 
Protein accessionYP_348572 
Protein GI77459066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG CGTTTCTCCC CTTCTCCCGC CCCAGTATCG GTGATGAAGA AATTGCCGCC 
GTGGAGCAAG TCCTGCGCTC CGGCTGGATC ACCACCGGGC CGAAAAACCA GGCCCTCGAA
GAACAATTTG CCCAGTACGT CGGCAGTCGT CATGCCGTGG CACTTTCCTC GGCCACCGGT
GCCATGCATG TAACGTTACT GGCGTTGGGA ATCGGCCCCG GCGATGAAGT CATCACCCCG
TCGCAGACCT GGGTGTCGAC CGCCAACATG ATCTCGCTGC TCGGCGCCAC GCCGGTGTTC
GTCGATGTCG ACCGCGACAC CCTGATGACC GACGCCGCGC GCATCGAAGC CGCCATCACC
CCGCGCACCA AAGCAATCAT TCCGGTGCAT TACGCTGGCG CCGCGTTTGA TCTCGACCCG
CTCTACGCGC TGGCCGACAA GCATGGTATC GCCGTGATCG AAGACGCCGC CCACGCCGCC
GGCACCCGCT ACAAGGGTCG TCACGTCGGC TCGCAAGGCA CCGCAATCTT TTCTTTCCAC
GCGATCAAGA ACATGACCTG CGCCGAAGGC GCGATGTTCG TCACCGACGA CGAAGCCCTG
GCCAACCGCG TGCGCATGCT CAAGTTCCAT GGCCTGGGTG TCGATGCCTA CGACCGCCTG
ACCCACGGCC GCAAACCCCA GGCCCAGGTG ATCGAGCCCG GTTTCAAATA CAACCTGGCC
GACATCAACG CCGCGATTGC GCTGGTGCAA CTGGAGCGTC TGGACGCAAT CAACGCCCGC
CGCACCGAGC TGGCCACGCA ATACCTGCAA AAACTCGAAG GCCTGCCCGT GCAACCGCTG
GCCGTGCCGA ACTACCCGCA ACAGCACGCC TGGCACCTGT TCATCCTGCG CATCGACAGC
GAACGCTGCG GCATGGACCG CGAAGCCTTC ATGAAGGGCT TGCAGGAGCA AGGCATCGGC
ACCGGCATCC ACTTCATCGC CACCCACCTG CACACCTGGT ATCGCCAGCG TGCCCCGCAC
CTGTCCCTGC CCGACACCGA GTGGAACTCG GCGCGGCTGT GCTCGATTCC CTTGTTTCCC
GACATGACCG ACCAGGATCT GGACCGGGTC GTCGGGGCCA TTGAACACCT GATGGGGAAA
CGCCCGTGA
 
Protein sequence
MSQAFLPFSR PSIGDEEIAA VEQVLRSGWI TTGPKNQALE EQFAQYVGSR HAVALSSATG 
AMHVTLLALG IGPGDEVITP SQTWVSTANM ISLLGATPVF VDVDRDTLMT DAARIEAAIT
PRTKAIIPVH YAGAAFDLDP LYALADKHGI AVIEDAAHAA GTRYKGRHVG SQGTAIFSFH
AIKNMTCAEG AMFVTDDEAL ANRVRMLKFH GLGVDAYDRL THGRKPQAQV IEPGFKYNLA
DINAAIALVQ LERLDAINAR RTELATQYLQ KLEGLPVQPL AVPNYPQQHA WHLFILRIDS
ERCGMDREAF MKGLQEQGIG TGIHFIATHL HTWYRQRAPH LSLPDTEWNS ARLCSIPLFP
DMTDQDLDRV VGAIEHLMGK RP