| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2831 |
|---|
| Symbol | |
|---|
| ID | 3712595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3264701 |
|---|
| End bp | 3266356 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_348562 |
|---|
| Protein GI | 77459056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTCGT CAGCCGCCGA TCAACCGCGA GCGCCCGGCC AGGCGCCGGT CAAGACCCGG
CGTTTCAGCA TTTCGCTGGT GTGGATCGTG CCGATCGTCG CGGTGCTGGT GGGCCTCTCG
CTGGTGGTGC ACAACCTGAT GCAGGAAGGC CCGACCATCA CCGTCACCTT CAAGACCGGC
AGCGGCCTGA CCGCCAACAA GACCGAAGTC AAATACCGCA ACGTGGTGAT CGGCCAGGTC
ACGGATGTCG AACTGAGCGA CGACCAGAAA AGCGTCAAGG CCACGATCAA ACTGGCCAAG
CAGGCCGAAA CCTTCACCCG TGAAGACTCG CAGTTCTGGG TCGTACGCCC GCGCATCGGT
GCGGGCGGCG TCTCGGGCAT CGACACGCTG CTGTCCGGTG ACTACATAGG GGCCGACATC
GGCCAGTCCA ATTCGCGCGC CAAACACTTC AAAGGCCTGG AGAACCCGCC GCCGATCACC
TACGGCGAAC CGGGCAAACG CTTCAACCTG CACGCTTCGG ATCTCGGCTC GCTGGACATC
GGCTCGCCAG TCTATTACCG CAAGATCCCG GTCGGCCAAG TCGTGGCCTA TGCGCTGGAC
GCCGATGGCA AAGGAGTGAA CATCGAGGTG TTCATCCATG CGCCGAACGA CGCCTACGTC
ACGGAAAACA CCCGGTTCTG GAACGCCAGC GGGATTGATG TCAACGTCGG TGCCAACGGT
TTTGCGGTGA AAACCGAATC GTTGTCGACC TTGCTGGTGG GCGGCATCGC CTTCCGAGCG
CCGGAGTACA GCCCCAACGA CGTTGCCGCT GCCGAAGAAA GAACCTACGA CCTGTTTGAA
GACCAGCAAA CCGCCCTCGC CCCGCCCAAC GGCAAAGCGC AGTACCTGAC CCTGCGTTTC
GATCAGGCCC TGCGTGGGCT GAAAGTCGAT GCGCCGGTGG AATTCCTCGG CATCGAGATC
GGCCGGGTGG TGAGCGTCAA CCTGGACTTC GACGCGAAAA AGCGCAGCTT CCCGCTCAAC
GTCGGCATCG TGATTTACCC GCAGCGCCTC GGCCAGGCCC ACATCAAGAT GCTCAAGGTA
CTCGACCACA ATCCGGACGA TGAAGCCGCT GCCGTGCGCC TGATCGGCAC CTTTATCGAC
AACGGTCTGC GTGCCCAGGC CCGCAGCGGC AACCTGCTGA CCGGCCAGCT GTACATCGCG
CTGGATTTCT TCCCCAAGGC CGAAAAAGTC GCGTTTGACC CCACCGCTCG CCCGATCAGC
GTTCCGACAG TCCCCGGCAG CCTCGAACAG TTGCAGGAAA AACTCGAAGC GATGATCGAC
AAGCTCAACA AGTTGCCGGT GGAGCGGATT GCCGGCAACC TCGACAGCAA CCTCGTGGAA
TTGCGCAAAG GCCTGACCCA GTTCAACGCC AAGACCCTGC CCGGCGTGCA GACTACCCTC
GCCGACGTGA GCAAGACCCT GCAGTCGGCC AGTTCGACTC TGGCCGAAGA TTCGCCGCAA
CGCGAACAAT TGACTCAGAC CCTCGACGAG CTCGGGCGCA TGTCCCGTTC GCTGCGTGAG
CTGTCCGATT ATCTGGGCCG TCATCCGGAA TCGTTGATTC GCGGCCGCCC CGACAACGCC
GCGCCGCTGG ACCTCAAAGG GCCGCCGCGC AACTGA
|
|---|
| Protein sequence | MESSAADQPR APGQAPVKTR RFSISLVWIV PIVAVLVGLS LVVHNLMQEG PTITVTFKTG
SGLTANKTEV KYRNVVIGQV TDVELSDDQK SVKATIKLAK QAETFTREDS QFWVVRPRIG
AGGVSGIDTL LSGDYIGADI GQSNSRAKHF KGLENPPPIT YGEPGKRFNL HASDLGSLDI
GSPVYYRKIP VGQVVAYALD ADGKGVNIEV FIHAPNDAYV TENTRFWNAS GIDVNVGANG
FAVKTESLST LLVGGIAFRA PEYSPNDVAA AEERTYDLFE DQQTALAPPN GKAQYLTLRF
DQALRGLKVD APVEFLGIEI GRVVSVNLDF DAKKRSFPLN VGIVIYPQRL GQAHIKMLKV
LDHNPDDEAA AVRLIGTFID NGLRAQARSG NLLTGQLYIA LDFFPKAEKV AFDPTARPIS
VPTVPGSLEQ LQEKLEAMID KLNKLPVERI AGNLDSNLVE LRKGLTQFNA KTLPGVQTTL
ADVSKTLQSA SSTLAEDSPQ REQLTQTLDE LGRMSRSLRE LSDYLGRHPE SLIRGRPDNA
APLDLKGPPR N
|
|---|
| |