Gene Pfl01_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2829 
Symbol 
ID3712593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3262202 
End bp3263290 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content59% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_348560 
Protein GI77459054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGT TGAAATCCAT GATCCCCGCC GCGCTGGCCC TGGCGTGCAG TGCCGGTGCC 
TTCGCCCAAC CCCAGGTCAG CGTCTACAAC TGGACCGATT ACATTGGCGA AACCACCCTC
GCCGACTTCC AGTCCTCCAG CGGGATCAAG GTGATCTACG ACGTCTTCGA CTCCAACGAA
ACCCTCGAAG GCAAACTGCT CGCCGGTCGC ACCGGTTACG ACGTGGTGGT GCCGTCCAAC
CACTTCCTCG CCCGTCAGGT AAAGGCCGGT GCGTTCCTCA AACTGGACCG CTCGCAACTG
CCGAACTGGA AAAACCTCGA CCCGAAACTG CTGGCCCTGC TTGAGAAAAA CGATCCGGGC
AACGAGCACT CGGTGCCGTA CCTGTGGGGC ACCAACGGCA TCGGCTACAA CGTCGACAAG
GTCAAGCAAG TGCTGGGCAT CGATCACATC GATTCCTGGG CCGTGCTGTT CGAACCGGAA
AACCTGAAGA AACTCACCCA GTGCGGTGTG TCGATGATGG ACTCGGCCGA TGAAGTGTTC
CCGGCCATCC TCAACTACAT GGGCATGGAC CCGCGCAGCG AGAAACCCGA AGACTACAAG
AAGGCCGAAG AGAAACTGCT TAGCATCCGG CCGTACATCA CCTATTTCCA TTCCTCGAAA
TACGTGTCCG ACCTGGCCAA CGGTGACATC TGCGTGGCCT TCGGTTACTC CGGCGACGTG
TTCCGGGCCG CCAATCGCGC CAAGGAAGCC AAGAACGGCG TGAACATCGC CTATTCGATT
CCCAAGGAAG GCGCGAACCT GTGGTTCGAC CTGCTGGCGA TTCCCGCCGA TGCCGGCAAC
ACCAAGGAAG CCCACGCCTT CATCAATTAC CTGCTCGATC CGCAAGTGAT CGCCAAGGTC
AGCGCCTCGG TGGGTTACGC CAACCCGAAC CCGGCGGCCA AGCAATATAT GGATCCCGAG
CTGGTCAACA ATCCCGAGGT CTATCCGTCT CAGGAAGTCC TCGACAAGCT CTACATCTCC
TCTACCCCGC CCCAGTCGAT CATGCGTCTG ATGACCCGGT CCTGGAGCAA AGTGAAGTCG
AACAAATGA
 
Protein sequence
MRLLKSMIPA ALALACSAGA FAQPQVSVYN WTDYIGETTL ADFQSSSGIK VIYDVFDSNE 
TLEGKLLAGR TGYDVVVPSN HFLARQVKAG AFLKLDRSQL PNWKNLDPKL LALLEKNDPG
NEHSVPYLWG TNGIGYNVDK VKQVLGIDHI DSWAVLFEPE NLKKLTQCGV SMMDSADEVF
PAILNYMGMD PRSEKPEDYK KAEEKLLSIR PYITYFHSSK YVSDLANGDI CVAFGYSGDV
FRAANRAKEA KNGVNIAYSI PKEGANLWFD LLAIPADAGN TKEAHAFINY LLDPQVIAKV
SASVGYANPN PAAKQYMDPE LVNNPEVYPS QEVLDKLYIS STPPQSIMRL MTRSWSKVKS
NK