Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2798 |
Symbol | |
ID | 3714539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3223930 |
End bp | 3225219 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | general substrate transporter |
Protein accession | YP_348529 |
Protein GI | 77459023 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.564516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCT GGTATCGCCA AATCACTCCT CGGGAGCGCA AAACGTTTTG GGCCTGCTTC GGCGGATGGT CCCTCGACGC ACTGGAAGTA CAAATGTTTG GCCTGGCGAT TCCGGCTTTG ATCGCCGCGT TCGCCTTGAC CAAGGGCGAT GCGGGGTTGA TCAGCGGAGT GACTCTGGTC ACGTCAGCTA TCGGCGGTTG GGTAGGGGGG ACATTGTCCG ACCGCTACGG CCGGGTGCGT ACGCTGCAGT GGATGATTGT GTGGTTCTCC TTTTTTACTT TTCTCTCCGC GTTTGTCACC GGTTTTAACC AGCTCTTGAT CGTCAAGGCG CTCCAGGGTT TCGGCATCGG CGGCGAGTGG GCAGCGGGTG CAGTATTGAT GGCCGAAACC ATCAATCCGC AGTATCGCGG CAAAGTGATG GGCACCGTAC AAAGTGCCTG GGCCGTGGGT TGGGGGCTGG CGGTCGGAGT GTTCACACTG ATTTATTCCC TCGTGCCGCA GGACATGGCG TGGCGCGTGA TGTTCCTGGT CGGGCTGCTA CCGTCGTTTC TGATTATCTG GGTGCGTCGT AATGTCGAGG AGCCCGACAG CTTCCAGCGT CTGCAAAAAG AAAACGCCAT CCCGCAAAGT TTCTTCAAAT CCCTGGCCGG CATCTTCCGC CCCGATTTGA TCCGCGTAAC GCTGTTCGGC GGTCTATTGG GGCTGGGTGC GCACGGTGGT TATCACGCGG TGATGACCTG GCTGCCAACG TTCCTCAAGA CTGAGCGCAA TCTGTCCGTA CTGAATTCTG GTGGCTACCT GGCGGTGATC ATTTTTGCGT TCTGGTGCGG ATGTGTCGTC AGTGGCTTTT TGATCGATCG GATTGGCCGG CGCAAAAACA TCGTCCTGTT CGCGCTTTGC TGTGTCGTCA CGGTGCAGAG TTATGTGTTC TTGCCGCTGA CCAATACCCA GATGCTGTTC CTGGGGTTCC CGCTCGGCTT TTTTGCGGCC GGTATTCCCG CAAGCCTTGG CGCGTTATTC AACGAGCTAT ACCCGGCAGA CGTGCGCGGT GCCGGCGTCG GCTTCTGCTA CAACTTTGGC CGAGTGCTTT CCGCGGTGTT CCCGTTCCTC GTCGGTCACA TGAGCGACTC CATGTCCCTT GGATCTGCGA TTGGTATCGA CGCAGGGATT GCCTATGGCG TTGCGGTGAT TGCGGCACTT TGTCTGCCGG AAACCCGTGG ACGCAGCCTC GAAGCTTCGA ATACATCGGT GACAGTCACG ATCAACGGCA ACGAGAGTGC GCGGGCCTGA
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Protein sequence | MFSWYRQITP RERKTFWACF GGWSLDALEV QMFGLAIPAL IAAFALTKGD AGLISGVTLV TSAIGGWVGG TLSDRYGRVR TLQWMIVWFS FFTFLSAFVT GFNQLLIVKA LQGFGIGGEW AAGAVLMAET INPQYRGKVM GTVQSAWAVG WGLAVGVFTL IYSLVPQDMA WRVMFLVGLL PSFLIIWVRR NVEEPDSFQR LQKENAIPQS FFKSLAGIFR PDLIRVTLFG GLLGLGAHGG YHAVMTWLPT FLKTERNLSV LNSGGYLAVI IFAFWCGCVV SGFLIDRIGR RKNIVLFALC CVVTVQSYVF LPLTNTQMLF LGFPLGFFAA GIPASLGALF NELYPADVRG AGVGFCYNFG RVLSAVFPFL VGHMSDSMSL GSAIGIDAGI AYGVAVIAAL CLPETRGRSL EASNTSVTVT INGNESARA
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