Gene Pfl01_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2798 
Symbol 
ID3714539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3223930 
End bp3225219 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content58% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_348529 
Protein GI77459023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.564516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCT GGTATCGCCA AATCACTCCT CGGGAGCGCA AAACGTTTTG GGCCTGCTTC 
GGCGGATGGT CCCTCGACGC ACTGGAAGTA CAAATGTTTG GCCTGGCGAT TCCGGCTTTG
ATCGCCGCGT TCGCCTTGAC CAAGGGCGAT GCGGGGTTGA TCAGCGGAGT GACTCTGGTC
ACGTCAGCTA TCGGCGGTTG GGTAGGGGGG ACATTGTCCG ACCGCTACGG CCGGGTGCGT
ACGCTGCAGT GGATGATTGT GTGGTTCTCC TTTTTTACTT TTCTCTCCGC GTTTGTCACC
GGTTTTAACC AGCTCTTGAT CGTCAAGGCG CTCCAGGGTT TCGGCATCGG CGGCGAGTGG
GCAGCGGGTG CAGTATTGAT GGCCGAAACC ATCAATCCGC AGTATCGCGG CAAAGTGATG
GGCACCGTAC AAAGTGCCTG GGCCGTGGGT TGGGGGCTGG CGGTCGGAGT GTTCACACTG
ATTTATTCCC TCGTGCCGCA GGACATGGCG TGGCGCGTGA TGTTCCTGGT CGGGCTGCTA
CCGTCGTTTC TGATTATCTG GGTGCGTCGT AATGTCGAGG AGCCCGACAG CTTCCAGCGT
CTGCAAAAAG AAAACGCCAT CCCGCAAAGT TTCTTCAAAT CCCTGGCCGG CATCTTCCGC
CCCGATTTGA TCCGCGTAAC GCTGTTCGGC GGTCTATTGG GGCTGGGTGC GCACGGTGGT
TATCACGCGG TGATGACCTG GCTGCCAACG TTCCTCAAGA CTGAGCGCAA TCTGTCCGTA
CTGAATTCTG GTGGCTACCT GGCGGTGATC ATTTTTGCGT TCTGGTGCGG ATGTGTCGTC
AGTGGCTTTT TGATCGATCG GATTGGCCGG CGCAAAAACA TCGTCCTGTT CGCGCTTTGC
TGTGTCGTCA CGGTGCAGAG TTATGTGTTC TTGCCGCTGA CCAATACCCA GATGCTGTTC
CTGGGGTTCC CGCTCGGCTT TTTTGCGGCC GGTATTCCCG CAAGCCTTGG CGCGTTATTC
AACGAGCTAT ACCCGGCAGA CGTGCGCGGT GCCGGCGTCG GCTTCTGCTA CAACTTTGGC
CGAGTGCTTT CCGCGGTGTT CCCGTTCCTC GTCGGTCACA TGAGCGACTC CATGTCCCTT
GGATCTGCGA TTGGTATCGA CGCAGGGATT GCCTATGGCG TTGCGGTGAT TGCGGCACTT
TGTCTGCCGG AAACCCGTGG ACGCAGCCTC GAAGCTTCGA ATACATCGGT GACAGTCACG
ATCAACGGCA ACGAGAGTGC GCGGGCCTGA
 
Protein sequence
MFSWYRQITP RERKTFWACF GGWSLDALEV QMFGLAIPAL IAAFALTKGD AGLISGVTLV 
TSAIGGWVGG TLSDRYGRVR TLQWMIVWFS FFTFLSAFVT GFNQLLIVKA LQGFGIGGEW
AAGAVLMAET INPQYRGKVM GTVQSAWAVG WGLAVGVFTL IYSLVPQDMA WRVMFLVGLL
PSFLIIWVRR NVEEPDSFQR LQKENAIPQS FFKSLAGIFR PDLIRVTLFG GLLGLGAHGG
YHAVMTWLPT FLKTERNLSV LNSGGYLAVI IFAFWCGCVV SGFLIDRIGR RKNIVLFALC
CVVTVQSYVF LPLTNTQMLF LGFPLGFFAA GIPASLGALF NELYPADVRG AGVGFCYNFG
RVLSAVFPFL VGHMSDSMSL GSAIGIDAGI AYGVAVIAAL CLPETRGRSL EASNTSVTVT
INGNESARA