Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2761 |
Symbol | |
ID | 3714502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3186837 |
End bp | 3187889 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_348492 |
Protein GI | 77458986 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.78325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTGCA ACCCGTTCAT TCGCGCCATC AGCCTGACAG GTTTCGATCC ATTTGCCCGG CGTCAGGGAC TGGAGCCGAA CCGGATGCTG CGCCAAGCGT GTCTGTCCGT AGCGTCACTG CAGCGCCCGG AAGACATCCT GTCCTTTCGC AATTACTGCC GCTTGTTGAC ACTGTGCCGG CAGCGCTCGA ACAACGCATT GTTCGGTTTG GAGTTCGGCC TCCATCAGGG AGTCGACGTC TTCGGTGACA TGTTTTTCCT GATTCACAAC ACCCGTACCG TCGGCGACGC GCTGCGCGAA CTGCGCGCCA ATTTCGCCCT CTACAACGGC GCGGCGCATC TCTATCTGGA GGTGGCCGAT GGCATCGCGT TACTGGGTTA TCGAGCCGAT GAGCAGGAGA TCGACGGCCT CGCTCAGGCC GAAGAGCTGG CGTGCGGGGT CGGTCTGCGC CTGATGCAAA CCCTGGCCAG TGCACCATGG CAACCCGAGG CAATCATGCT CCGCCATGCG CCTTTGGCGG ATGAAGGCCT CTATCGGCAG GCGCTAAACA TCACGCCGAC GTTTTCAGCC GCCCACACGG GATTGCTCTT CAATGCCAGT GTGCTCGCGC AGCCGCTGGA TTGCGCCAGT GAAGTCTTGC ATCAGCTCAT CGCTGAACAT TTGGCAGGTA TTGAACGTCT GTCCACCGAT GCCATGCCGG GATACGTCAG GCAATTGCTG CGCAATCTGT TGCCCAGCGG ACGCGCGACG ATCGACAGAG TGGCCGATTG CATGGCCGTC ACCCCGAGAT CCTTGCAGCG CCACCTGGCT GAGGAAAACA CCTCTTTTCA GCAGTTGCTG GACGAGACGC GCCAGCAGTT GGCGCGCAAA TACCTGCAGG TCCCGACGAT CAGTCTGCCG CAGGTAGCGC ACCTGCTGGG CTACGCCGAT GTCAGTACAT TCTCGCGGGC TTTTCATCGA TGGTTTGGGG TGTCGGTGCT GGAGTGGTGC AGGCAATTCG GTGTGAACAG ACAGCCCTTG CTGCTTCGAA ATCGAGCGAA AGAGCGACCT TGA
|
Protein sequence | MACNPFIRAI SLTGFDPFAR RQGLEPNRML RQACLSVASL QRPEDILSFR NYCRLLTLCR QRSNNALFGL EFGLHQGVDV FGDMFFLIHN TRTVGDALRE LRANFALYNG AAHLYLEVAD GIALLGYRAD EQEIDGLAQA EELACGVGLR LMQTLASAPW QPEAIMLRHA PLADEGLYRQ ALNITPTFSA AHTGLLFNAS VLAQPLDCAS EVLHQLIAEH LAGIERLSTD AMPGYVRQLL RNLLPSGRAT IDRVADCMAV TPRSLQRHLA EENTSFQQLL DETRQQLARK YLQVPTISLP QVAHLLGYAD VSTFSRAFHR WFGVSVLEWC RQFGVNRQPL LLRNRAKERP
|
| |