Gene Pfl01_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2752 
Symbol 
ID3714493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3174265 
End bp3174846 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content56% 
IMG OID 
ProductTetR family transcriptional regulator 
Protein accessionYP_348483 
Protein GI77458977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.208461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAA TGGGCGCTGA ATTACGCCGG CAGGATTTCG TCGAAGCAAC GATCAAAGTG 
ATTGCCGAGC ACGGTGTCGC CAATGCAACG ACCCGACGGA TTGCGGCGGC GGCCGGTTGT
CCGTTGGCAT CGTTGCATTA CGTGTTCCAT ACCAAGAACG ACCTCTTCTA TGCCGTCTAT
GAGTCACTGT TTAACCTGCC TCATCAAGCG TTGGAACACG TCCCTGCCGG GACAACTGCC
GCTGATACGA CTGCCGAAGT CCTGCGACAG TTGATCACTT GGTTCATCGA TCATCCGGAT
GCGGCCAAGG CGCAGAGTGA GTTGTTTTTT TGGGCACTGC GCAATGACCC CGAAATGGCA
AGCAAGATTT ACTCAGTAGC CATTGAAGCG ACTGAGCAGG CACTGGAGCG AGCTGTAGGC
GCAGAGCTGG GGGAAAAGTT TTTAAAGGCC GCAAGTCGGC TTCTGGTCCA ACTGGTTGAC
GGGTTGACTA TCGCGTGGTC CGCCCATGGA GACCTGCATA GATTGAGAGC CGAAACCGAG
ACGGCTTGCG CCGCACTGGC CCTGCTGGTG GCCAGTCACT GA
 
Protein sequence
MARMGAELRR QDFVEATIKV IAEHGVANAT TRRIAAAAGC PLASLHYVFH TKNDLFYAVY 
ESLFNLPHQA LEHVPAGTTA ADTTAEVLRQ LITWFIDHPD AAKAQSELFF WALRNDPEMA
SKIYSVAIEA TEQALERAVG AELGEKFLKA ASRLLVQLVD GLTIAWSAHG DLHRLRAETE
TACAALALLV ASH