Gene Pfl01_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2748 
Symbol 
ID3714489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3167403 
End bp3168347 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content59% 
IMG OID 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_348479 
Protein GI77458973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000496778 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAATC TGATTGCTTT ACTCGTTCTA ATGTTATCGG CGTTATCGCA GGCTTCGCCC 
TTGCCGACCG TACCTGCAGC AAAAACTGCC AACGCCAGTG CCGCCACGCT GTTGAGTGTT
GCCTGGGCTG GGGAGCGAAC CGTTGCCGTC GGCGATCACG GGGTGGTGTT GCTGTCGGAC
GACCGAGGCC AGCATTTCCG TCAAGCGACA TCCGTACCGG TGTCCACGCC TTTGACCGGT
GTGTCCTTCG TCGATGCCAG ACAGGGCTGG GCTGTCGGCC ACTGGGGCGC AATTCTCGCC
ACCAGGGACG GAGGTGAGAA TTGGCAAGTT CAACGCTTGT CCAGTGCAGA AGATCGGCCA
TTGTTTGCGG TGCACTTTTT CAACCCGATC CAGGGTGTCG CGGTAGGGCT GTGGTCGCTG
GTGCTGACAA CCGATGACGG CGGAAAGACC TGGATCGAGC AAAAAATCGA TGCGCCTCCC
GGAGCGAGTC GTGCCGACTT GAATCTGATG GGACTGTTTG CCGATGGAGC AGGGCATTTG
TACGCAACGG CGGAACGCGG CCAGTTATTG CGCTCCGATG ACCAGGGCAA ACACTGGCGC
TATCTGGATA CGGGCTACAG CGGCACGTTG TGGACAGGGG CCGTGCTTGG CGACGGTTCA
CTGCTGGTGG GCGGGCAACG CGGCACCTTG TTGCACAGCT CTGCAGACGG TTCGAACTGG
CAGCGCGTAC CGTTGCAAAG CAAGAGTTCA GTCACAGCCA TAGATGTTTC CGGGCGAGCA
GTGATTGCGG TAGGACTCGA CGGTTTGATG GTTCGCAGTG ACGACGGTGG GAGCAGTTTT
CACGAGCAAT CCAGCAGCGA CGGTGTTTCT CTCACCGCGA TCCTGCTCAA CGGTGACACC
TCACCGATTC TGTTTTCACG GCGAGGCGTC GTCCCTCAAC GCTGA
 
Protein sequence
MRNLIALLVL MLSALSQASP LPTVPAAKTA NASAATLLSV AWAGERTVAV GDHGVVLLSD 
DRGQHFRQAT SVPVSTPLTG VSFVDARQGW AVGHWGAILA TRDGGENWQV QRLSSAEDRP
LFAVHFFNPI QGVAVGLWSL VLTTDDGGKT WIEQKIDAPP GASRADLNLM GLFADGAGHL
YATAERGQLL RSDDQGKHWR YLDTGYSGTL WTGAVLGDGS LLVGGQRGTL LHSSADGSNW
QRVPLQSKSS VTAIDVSGRA VIAVGLDGLM VRSDDGGSSF HEQSSSDGVS LTAILLNGDT
SPILFSRRGV VPQR