Gene Pfl01_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2721 
Symbol 
ID3714416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3138092 
End bp3138841 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348452 
Protein GI77458946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTTC AAGGCAAAGT CGCGATCATC ACAGGTGCTG CCTCCGCACG TGGTATCGGC 
CGCGCGACAG CTACGACCTT CGCTCAACAT GGCGCCTGGG TGGTGATTCT GGATCTGGAC
GCATCCGCTG CCCGCGATGC AGCTGCCTCT TTGGGCGAGG GGCATCTCGG CCTGGCTGCC
AACGTCGCCG ACGAGTCCCA GGTGCAGCAG GCTGTCGCCA CCGTCATCGA ACACTTTGGC
CGGATCGACA TACTGGTCAA CAATGCCGGC ATCACCCAAC CCCTCAAGAC CCTCGATATC
CGCCCCGGTG ATTACGATAA GGTGCTGGAC GTCAGCCTGC GCGGTACGTT GCAGATGTCC
CAGGCGGTAA TTCCGCTCAT GCGCCAGCAA GCCAGCGGCA GCATTGTGTG CATGTCTTCG
GTTTCCGCGC AGCGCGGCGG CGGCATTTTT GGCGGGCCTC ATTACAGCGC CGCCAAGGCC
GGTGTGCTGG GCCTGGCCAA GGCCATGGCG CGTGAGCTGG GGCCGGACAA CGTGCGCGTC
AACTCCATCG CCCCCGGCCT GATTCACACC GACATTACTG GCGGCCTGAT GCAGGACGAG
CGCCGCCACG CGATCATCGA CGGCATTCCG TTGGGTCGCC TGGGCGAGGC GCAGGATGTG
GCCAATGCGG CGCTGTTCCT GGCCAGCGAC TTGTCCTCCT ATCTGACTGG CATCACCCTG
GATGTGAACG GCGGCATGCT GATTCACTGA
 
Protein sequence
MLLQGKVAII TGAASARGIG RATATTFAQH GAWVVILDLD ASAARDAAAS LGEGHLGLAA 
NVADESQVQQ AVATVIEHFG RIDILVNNAG ITQPLKTLDI RPGDYDKVLD VSLRGTLQMS
QAVIPLMRQQ ASGSIVCMSS VSAQRGGGIF GGPHYSAAKA GVLGLAKAMA RELGPDNVRV
NSIAPGLIHT DITGGLMQDE RRHAIIDGIP LGRLGEAQDV ANAALFLASD LSSYLTGITL
DVNGGMLIH