Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2715 |
Symbol | |
ID | 3714410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3132125 |
End bp | 3132889 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_348446 |
Protein GI | 77458940 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.479047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCA GCGCTAACAC GATCTTCATC ACCGGCGGCA CCTCCGGCAT TGGCCGCGCT TTGGCCGAGG CATTTCACCA GCGCGGCAAT CAGGTCATCA TCGCGGGCCG TCGACAGGCC CTGCTGGATG AGATCGCCCG GGCCAATCCC GGTATCGACA CGGTCCAGCT GGACATCAAT GACCCGCAGC AAATCAAGGA TGTCGCCCAG GAAGTCATAC GCCGCCACCC CTCGCTGAAC GTGATCATCA ATAACGCCGG GATCATGCCG TTCGATAATC CAGCCTCGGG TGATTACGAC GACGAACAGG CGGTGAGTCT TTTGCAAACC AACCTGCTCG GCCCGGTGCG TGTCAGCGCC GCATTCGTCG AGCACCTCAA GCGTCAACCC GAAGCCTTCA TCATCAACAA CAGCTCCGTG CTGGCCTATC TGCCACTGGC TGCGACAGCG TTGTACTCGG CGACGAAGGC GGCCATTCAC TCCTACTCGC TGTCGCAACG CTTCACCCTG CGCGACACCC GCGTAAAAGT GCTGGAGATC GCGCCGCCAT GGGTCGACAC CGACCTGATT CACAAAAGCG GCGATGAACG CGCCATGCCG CTCGACGAAT TCATTCGGGA AACCCTGGAA AAACTCGAAA CGGCGACCAC GGAAGTGTTG GTGGATCGGG TCGTCCCGTT GCGAGCCAAC CAAGGCATTA ATGAGCATGC GCTGATCAAT CAGTTCAACC AGGCACTGGA GGAGAACCCG ATTCCGGTCG CCTGA
|
Protein sequence | MKLSANTIFI TGGTSGIGRA LAEAFHQRGN QVIIAGRRQA LLDEIARANP GIDTVQLDIN DPQQIKDVAQ EVIRRHPSLN VIINNAGIMP FDNPASGDYD DEQAVSLLQT NLLGPVRVSA AFVEHLKRQP EAFIINNSSV LAYLPLAATA LYSATKAAIH SYSLSQRFTL RDTRVKVLEI APPWVDTDLI HKSGDERAMP LDEFIRETLE KLETATTEVL VDRVVPLRAN QGINEHALIN QFNQALEENP IPVA
|
| |