Gene Pfl01_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2715 
Symbol 
ID3714410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3132125 
End bp3132889 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content59% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348446 
Protein GI77458940 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.479047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA GCGCTAACAC GATCTTCATC ACCGGCGGCA CCTCCGGCAT TGGCCGCGCT 
TTGGCCGAGG CATTTCACCA GCGCGGCAAT CAGGTCATCA TCGCGGGCCG TCGACAGGCC
CTGCTGGATG AGATCGCCCG GGCCAATCCC GGTATCGACA CGGTCCAGCT GGACATCAAT
GACCCGCAGC AAATCAAGGA TGTCGCCCAG GAAGTCATAC GCCGCCACCC CTCGCTGAAC
GTGATCATCA ATAACGCCGG GATCATGCCG TTCGATAATC CAGCCTCGGG TGATTACGAC
GACGAACAGG CGGTGAGTCT TTTGCAAACC AACCTGCTCG GCCCGGTGCG TGTCAGCGCC
GCATTCGTCG AGCACCTCAA GCGTCAACCC GAAGCCTTCA TCATCAACAA CAGCTCCGTG
CTGGCCTATC TGCCACTGGC TGCGACAGCG TTGTACTCGG CGACGAAGGC GGCCATTCAC
TCCTACTCGC TGTCGCAACG CTTCACCCTG CGCGACACCC GCGTAAAAGT GCTGGAGATC
GCGCCGCCAT GGGTCGACAC CGACCTGATT CACAAAAGCG GCGATGAACG CGCCATGCCG
CTCGACGAAT TCATTCGGGA AACCCTGGAA AAACTCGAAA CGGCGACCAC GGAAGTGTTG
GTGGATCGGG TCGTCCCGTT GCGAGCCAAC CAAGGCATTA ATGAGCATGC GCTGATCAAT
CAGTTCAACC AGGCACTGGA GGAGAACCCG ATTCCGGTCG CCTGA
 
Protein sequence
MKLSANTIFI TGGTSGIGRA LAEAFHQRGN QVIIAGRRQA LLDEIARANP GIDTVQLDIN 
DPQQIKDVAQ EVIRRHPSLN VIINNAGIMP FDNPASGDYD DEQAVSLLQT NLLGPVRVSA
AFVEHLKRQP EAFIINNSSV LAYLPLAATA LYSATKAAIH SYSLSQRFTL RDTRVKVLEI
APPWVDTDLI HKSGDERAMP LDEFIRETLE KLETATTEVL VDRVVPLRAN QGINEHALIN
QFNQALEENP IPVA