| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2709 |
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| Symbol | |
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| ID | 3714404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 3120580 |
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| End bp | 3123201 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_348440 |
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| Protein GI | 77458934 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.602276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCT CCAGCCGTGC GACGTCGTTA CCCACCCTGC AGGGCTCTGT CACCCGGCGT
CTGGCCGTCG CGGTGGGTGC GCTGTTCATT GCCGGAGTGA TGGCGGCGAC CGCTGCGTTG
CTCGGCATTG CCACTCAACT GGATGAGGAT GACGTCAATG ACGTCCGGTT CTATTCGGCC
CGGGCGCTGG AGAACCGAAT CACGGCATCG AAGAACTACA TCACTAGTTA CGCCTACTGG
ACGACAGCCT ATGAGCGTTT GAGCGGTACG GTCGACACGA ACTGGGCCTA CACCGAGCAG
AACATGGGCA AGACCCTGTT TACCAGCGAC GGCTATGACG GTCTGTTCGT GCTGGATCGA
GAACGCACCA AATACGCCGT CGTTCGCGGG CAAATGCTCG ATGCGCAACT GCCCCAGTTC
CTTCAGCTTT CGGCGAACAG TCTGGTGGAG CAAGTGCAGA GTCAGCCCGA CCTGACCAAG
CCCGTCAGTA CTTATTCATT GTTCGAAGAC TGGCCGGCGC TGGTCACCGC GGCGGCGATC
CTTCCCAACG ATGAGCGCCC GGTAGGCGAT CCACAAAAGA CTTCGGTACT GGTATTCGTC
GACAATCTGA CACCCACCAA GTTGCGCAAG ATCGGCAGCG GGTACGGGCT GAACAATCTG
TCGCTGGCAC CGGACGGCAC CATCGACCCG GGCCAGCCTC GCGTCCCGCT GGACAGCACC
GGATACAGCC TCGTTGCCGA TCTGGAGCGA CCGGGCCGGC ATCTGCTCTG GTCGTTGCTG
CCAACGCTCG GCCCCGCTTT GCTCGTGTTG ATGGCCCTGA CGGTCTGGTT CTTTCGCCAT
GCGCTACGTT CCTCGCGGTA TGTCGACGAC AGTTTTGAAG CGATGCAGGC GTCGAATCAG
GCATTGCTGG CGTCCAACCG CGCACTGGAA GCCAGCGAGG AGCGCTTTCG GGCGGTGGCC
GAAGCGGCGT CCGACTGGAT CTGGGAGGTG GATGAAGCGT TGTCCATCAC CTATCTGTCG
ACCCGGTTCA GTGCTGTCAC CGGTTATCCG CAGGCCCAGT GGATCGGGAA ACACATCGGA
CACTTGCTTG TCTGCGACAC CACTCCGCTG GATCTGTGGC TGAAGAAACT CGATGAGGAA
AGCAACGCCA GCGACCTGCG TTGCACCTAC CGTGACCGCG AGGGGCAACA GCGCCACTGC
CGTCTCTCGG CCAGGCCGAT CGTGGAAAGT ACGGCAGTGG TCGGCTATCG CGGCACGGCC
AGCGACATCA CCGATGAGGT CGCCGCCCAT GCGCAGATCC AGCACCTGTC CTTGCATGAC
GCGCTGACGG GCCTGCCCAA CCGCAACAAA CTGTCGCGCT ATCTGGACGA CGCTCTGCTG
CTCAAGGAGC ACGCCCCGCC TTTATCGGTG CTGATGATTG ACCTGGACAA TTTCAAGCCG
ATCAACGATT CGCTCGGGCA CCCCGCCGGC GATGCTGTGT TGCAAGAGGT TGCCGGCCGA
CTGCGCGAAT GCACGCGCGA CCACGATATC GTCGCCCGTC TGGGCGGTGA CGAGTTCGTC
GTGGTGCTCT GCGGCATGGA CACGCATCAG GAGATCGACA GGTTCTGCAC ACGCCTGATC
GGCAGCCTGC ATCAACCCAT CCTCTTCGAA CAGCAACCGT TGCACATCGG CGCCAGTGTC
GGCATCGCTC TGAGCCGGCG TCACGGGTAC GTCGCCAGTG AGCTGATCCG TTGCGCAGAC
ATTGCGCTGT ACCAGGCCAA ATCCGAAGGC AAAAACACCT GGTGCTATTT CGAAGCGCAC
ATGAGCGATC AGATCCAAAC CCGTCGGCAG ATGGAGGACG ACCTTCGAAG GGCCCTGACG
AACAATGAGT TCGTGCTGCA CTTTCAACCC CGATACAAGG TCGATGGCAA GGAAATCGTT
TCGGTCGAGG CTCTGGTGCG CTGGCAGCAT CCGGTAAAAG GGTTGCTCGG ACCGGATTTA
TTCATTCCGC TGGCCGAACA GACCGACCTG ATTGTTCCCC TCGGTCGCTG GGTCCTGCGT
GAGGCTTGTG AAACGGCACT GACCTGGCCG GCGGATATTC TCCTGTCGGT CAACCTGTCA
CCTGCGCAGT TTGCGATCAG CGATGTGGTC GAAGATGTAC GCGAAGTGCT GGTGGGTACT
CGCTTCCCGG CCAGCCGGCT GGAGCTGGAA ATCACCGAGA ACGTAATGCT CAACGACACG
GACGGCGCGT TGACCACCAT GACCGCGCTC AAGGAACTGG GCGTGCGCCT GAACATGGAT
GACTTCGGCA CCGGTTATTC CTCCCTTGGC TATCTGCGTG CCTACCCGTT CGATGGCATC
AAGATCGACA AACGTTTCAT TGCTTCAATC AGCACCGGCG CCAATGATCG GGCGGTGGTG
CAGGCCATCA TCGGACTGGG TAAAGCGATG GGGCTGACCG TGACCGCTGA AGGCGTTGAA
ACCGAGGAAC AACTGGACAT TCTGGGCAAG GATCAATGCA ACGAAGTCCA GGGTTATTAC
ATGAGTCGCC CGATCGACAG GGCGGCCTTC GCCAGTCTTT TGCAGGCATC AAGAGCCGCC
GCTGTCGATC CTTCCAGGCA ACGAAAAGGC CGGGTGACCT GA
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| Protein sequence | MDISSRATSL PTLQGSVTRR LAVAVGALFI AGVMAATAAL LGIATQLDED DVNDVRFYSA
RALENRITAS KNYITSYAYW TTAYERLSGT VDTNWAYTEQ NMGKTLFTSD GYDGLFVLDR
ERTKYAVVRG QMLDAQLPQF LQLSANSLVE QVQSQPDLTK PVSTYSLFED WPALVTAAAI
LPNDERPVGD PQKTSVLVFV DNLTPTKLRK IGSGYGLNNL SLAPDGTIDP GQPRVPLDST
GYSLVADLER PGRHLLWSLL PTLGPALLVL MALTVWFFRH ALRSSRYVDD SFEAMQASNQ
ALLASNRALE ASEERFRAVA EAASDWIWEV DEALSITYLS TRFSAVTGYP QAQWIGKHIG
HLLVCDTTPL DLWLKKLDEE SNASDLRCTY RDREGQQRHC RLSARPIVES TAVVGYRGTA
SDITDEVAAH AQIQHLSLHD ALTGLPNRNK LSRYLDDALL LKEHAPPLSV LMIDLDNFKP
INDSLGHPAG DAVLQEVAGR LRECTRDHDI VARLGGDEFV VVLCGMDTHQ EIDRFCTRLI
GSLHQPILFE QQPLHIGASV GIALSRRHGY VASELIRCAD IALYQAKSEG KNTWCYFEAH
MSDQIQTRRQ MEDDLRRALT NNEFVLHFQP RYKVDGKEIV SVEALVRWQH PVKGLLGPDL
FIPLAEQTDL IVPLGRWVLR EACETALTWP ADILLSVNLS PAQFAISDVV EDVREVLVGT
RFPASRLELE ITENVMLNDT DGALTTMTAL KELGVRLNMD DFGTGYSSLG YLRAYPFDGI
KIDKRFIASI STGANDRAVV QAIIGLGKAM GLTVTAEGVE TEEQLDILGK DQCNEVQGYY
MSRPIDRAAF ASLLQASRAA AVDPSRQRKG RVT
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