Gene Pfl01_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2705 
Symbol 
ID3714400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3115042 
End bp3115722 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348436 
Protein GI77458930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.229078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC ATCGCTCACT GGCCGTGTTG TTTGCCGCCA CCCTCAGCCT GTCGGGGTGC 
AGCAGCAAGA AGCTTCCGAC CGAGCCGCAG GCCGGGTTTT TACGGGATTA CAGCGTGCTC
AAGGAAGGGC AGACCGCTTC GGGGCAGACG ATCCTGAGCT GGGTCAGCCC GGCATTGGCG
AGGGGCCGTT ACACCCGGGT TTACCTGGCG CCGAGCGAGT TTTATCCACG GCCCCAGCCT
TCGCCGCGCA TTCCCCAAAG TACTTTGTCG GGCGTAACCC ATTATTACGA CGCAGCCCTC
AGGCTGGAGC TGGGCAAAGT GCTGCCGCTG GCGTCGAAAC CCGGCCCGAA CACACTGATC
GTCAAACCGG CCATCACCCA GGTCGCGGCC AGCACTCAGG GCCTGCGTTT TTATGAATGG
CTGCCGGTGA CGCTGGTTGC GGCCGGCGTG AGCAGCGCCA CCGGCATTCG TGACCGCGAC
AGTGAAATCG CCACGGAAGT GTCCTTCGAG GACGGCTCGA CCGGGGAAGT CGTGGCCGAA
GTGGTGCGCA AGGGCAAGGG CGTGCCGCTG GAAAACGACA AACAGGTCAT GACGCCCGAT
AACGTGAAAG CCGTCCTCGA TGGCTGGGCC ACGGACTTGA GTCAAACCTA TGTGCCGATT
CAGCGGGCCG CGCTGCGCTA G
 
Protein sequence
MSSHRSLAVL FAATLSLSGC SSKKLPTEPQ AGFLRDYSVL KEGQTASGQT ILSWVSPALA 
RGRYTRVYLA PSEFYPRPQP SPRIPQSTLS GVTHYYDAAL RLELGKVLPL ASKPGPNTLI
VKPAITQVAA STQGLRFYEW LPVTLVAAGV SSATGIRDRD SEIATEVSFE DGSTGEVVAE
VVRKGKGVPL ENDKQVMTPD NVKAVLDGWA TDLSQTYVPI QRAALR