Gene Pfl01_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2702 
Symbol 
ID3714397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3112510 
End bp3113841 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content65% 
IMG OID 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_348433 
Protein GI77458927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.118263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC GGATGCTGCG GCGCGACACC CTCAGCCGGC GGATTGCCCT GACAATCGTC 
GCGGCGATGC TCGCTTCGCT GCTGCTCAAT GCGCTGTTCG TTCAGGTCGC GGGGATCTGG
GCCCGACCGC CGATCGAGCG CACCGGGCTG CTGGAACAGA TCGCCGCCAC CACCCGAGTG
ATCGAGGCAG CGCCGGCGAC CTTGCGCCCG CAACTGGCCA GTGCCGCCAG CAGCCCGATG
CTTGAAGTGC TGTGGAAACC TCGTCGGGTC GACTTCGGCC TGCCGGGGGA AGGCGAACAG
GTCGAGGCCG GAAAAGTGCC GGCGCTGCGG CAATTGCTCG GCGATGACCG GCAGATCGAC
GTGTTCAACC CCGATGACTG GCCAGCCGGT AGCCCTCGCG CGCACTACAT GGCGCTGGTA
CGGCTGGCCG ATGACAGCTG GCTGTCGTTC ACGCCGCCGG AGCGCAGTTG GGGCTTGAGC
CTGAACGTGC GGATTGCCGT CATCGTTGCC CTGGGGCTGG TCGCCACCCT GTTGGTCGCC
TGGCTCGCCA CACGGCAACT GGCTCAGCCG TTGCAGCGCT TTGCCCATGC GGCGCGGCGT
TTCGGCGGGG ATCTGAAAGC GCCGCCGATT CATCTCGAAG GCCCGCACGA AATCCGTCAG
GCCATCGTCG CGTTCAACAC GATGCAGGCG CAGATCCAGC ATTTCATCGG CGAGCGCACC
CACATGCTCG CCGCCATCTC CCACGACTTG CGCGCCCCGC TGACCCGGAT GCGCCTGCGC
AGCGAGTTCA TGGAGGATCT GGACCATCAG GGCAAACTGA TCCGCGACAT CGAGGAAATG
CAATCGATGA TCAACGCCGC CCTGGCGTTC TTCCGGGAAG ACACCCACCT GGAGCAATCC
ACCGCGTTCG ATCTGTCGGA GTTGCTGCAA ACCATCGTCG ATGACTACCG CGATCAGCAC
ATCGACATCG ACTTCAGCGG TCCGGCACAT GTGGTGTACG ACGGCCGGCC GCTGGGCATC
AAACGGGTCA TCGTCAATCT GTTGGATAAC GCGGTGAAAT ACGCACAGCG CCCCAGCGTG
GCGCTGAGCA GCGATGACAC GTCGATCCGC ATCGAGGTGA TAGACGAGGG GCCGGGAATT
CCTGAGGACG CACTGGAGCG GGTATTCGAT CCGTTCTTCC GACTCGAGAC CTCGCGCAAC
CGCGACACCG GCGGGGTCGG GCTCGGTCTT TCGGCGGCAC GGGGAATCAT TCGTGAACAG
GGTGGCGAAC TCAGTTTGCG TAACCGCCGC AGCGGCGGCT TACGCGCCCG GGTTGAATTG
CCGCATCGCT GA
 
Protein sequence
MIGRMLRRDT LSRRIALTIV AAMLASLLLN ALFVQVAGIW ARPPIERTGL LEQIAATTRV 
IEAAPATLRP QLASAASSPM LEVLWKPRRV DFGLPGEGEQ VEAGKVPALR QLLGDDRQID
VFNPDDWPAG SPRAHYMALV RLADDSWLSF TPPERSWGLS LNVRIAVIVA LGLVATLLVA
WLATRQLAQP LQRFAHAARR FGGDLKAPPI HLEGPHEIRQ AIVAFNTMQA QIQHFIGERT
HMLAAISHDL RAPLTRMRLR SEFMEDLDHQ GKLIRDIEEM QSMINAALAF FREDTHLEQS
TAFDLSELLQ TIVDDYRDQH IDIDFSGPAH VVYDGRPLGI KRVIVNLLDN AVKYAQRPSV
ALSSDDTSIR IEVIDEGPGI PEDALERVFD PFFRLETSRN RDTGGVGLGL SAARGIIREQ
GGELSLRNRR SGGLRARVEL PHR