| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2695 |
|---|
| Symbol | |
|---|
| ID | 3714390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3104487 |
|---|
| End bp | 3105344 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_348426 |
|---|
| Protein GI | 77458920 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00727931 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACT ATCCAAAACC CCCGTTCCCG AAACAGGCGC AACCGGTTCC CGGTTCGCAG
CGCAAGATGG AGCCGTACCC CGATTGCGGC GAACAGAGCT ACACCGGCTC CGGTCGGCTG
GCCGGCAAGA TTGCCTTGAT CACCGGCGCC GACAGCGGCA TCGGCCGGGC GGTGGCCATT
GCCTTCGCCC GCGAAGGTGC CGATGTGGCG GTCGCCTATT TGAATGAACA TGAAGATGCC
AAGGAAACCG CGCGCTGGGT CGAACAGGCC GGTCGCCAGT GCCTGTTGCT GCCTGGTGAC
ATTGCGCAGA AAGCCCAGTG CCAGGCGTTG GTGGATCAAA CCGTTGAGCA CTTCGGCCGC
ATCGACGTGC TGGTCAACAA CGCGGCCTTC CAGATGACCC ATGAAACCTT CGAGGAGATT
CCCGACGACG AATGGGTGAT GACCTTCGAC GTCAACATCA CCGCGATCTT CCGCCTGTGT
CAGGCCGCCA TCAAACACAT GGGACCTGGC TCCTCCATCA TCAACACCAG TTCGATCAAC
TCGGACATGC CCAAGCCCAC CCTGCTCGCC TACGCCACCA CCAAAGGCGC GATCGCCAAT
TTCACCGGTG GTCTGGCGCA AATGCTCGGC CCGAGGGAAA TCCGCGTGAA TTGCGTCGCA
CCGGGGCCGA TCTGGACGCC GCTGATCGTC TCGACCATGC CCGATGAGGA AGTGCAGCAT
TTTGGCGAGC AAACACCACT GGGGCGTCCC GGCCAGCCAG TGGAGGTCGC GCCGATCTAC
GTACTGCTGG CATCGGATGA AGCCAGCTAC ATCACCGGCC AGCGCTACGG CGTGACCGGC
GGCAAACCGA TGCTCTGA
|
|---|
| Protein sequence | MTDYPKPPFP KQAQPVPGSQ RKMEPYPDCG EQSYTGSGRL AGKIALITGA DSGIGRAVAI
AFAREGADVA VAYLNEHEDA KETARWVEQA GRQCLLLPGD IAQKAQCQAL VDQTVEHFGR
IDVLVNNAAF QMTHETFEEI PDDEWVMTFD VNITAIFRLC QAAIKHMGPG SSIINTSSIN
SDMPKPTLLA YATTKGAIAN FTGGLAQMLG PREIRVNCVA PGPIWTPLIV STMPDEEVQH
FGEQTPLGRP GQPVEVAPIY VLLASDEASY ITGQRYGVTG GKPML
|
|---|
| |