Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2685 |
Symbol | |
ID | 3714360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3091193 |
End bp | 3092881 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | triacylglycerol lipase |
Protein accession | YP_348416 |
Protein GI | 77458910 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.871664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000237171 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGGACTGT TCGATTACAA AAATGCCGAC GGCAAAGCGC TGTACAGCGA TGCCATCGCC CTGACGCTGT ATGCCTACAC GCCGACCGGG CAGGCCTTGC CCGGCACTGG CTGGAAGCCG ATCGGCGCCA CGGCGCTGGG CTATCAGGGC AAGGTCGGGG TGCAGGGCAC GTTCTTCGGC GAGAAGGACG GCTTCACCAG CGCCGAAGCC GAAGTGCTCG GCAAGTACGA CGCCGCGGGT AAGCTGATCG GCATCGGCGT GGCCTTCCGC GGCACCGGCG GGCTGGGTTA CAGCGACACC TTCGGCGACA TGAAAAACAA CCTGCTGGCT GCCATTGGCC CGTCGGACTA CGCCACTCAG TACGCGAAAA ACGCCTTCGA CAACCTGCTC AAATCGGTGG CCGCGTTCGC TGTCGCCCAC GGCATTGCGG CCAAGGACGT ACTTGTCAGC GGCCACAGCC TCGGCGGTCT CGGGGTCAAC AGCGTGGCGG AGTTGAGCGC GAGCAACTGG GGCGGGTTTT TCAAGGACGC CAACTACATT TCGTTCGCCT CGCCGACCCA GAGCAGCACC GGCACGAACG TGCTGAACAT CGGCTACGAA AACGACCCGG TGTTCCGCGT GCTCGACGGC ACCACGTTCA GTACCGCGTC GATGGGCAAG CACGACAAAC CGCACGATTC GACCACTGAC AACATCGTCA ACTTCAACGA CAACTACGCG TCCACCGCGC AGAATCTGGT GCCGTTCAGC ATCGCCAACC CGCTGAACTG GTCGGCCCAC AGCTCGCTGG GGTATGCCGA CGGCCTGAAT CGGGTGATCG CGTCGAAGTT CTACGGCCTG ACGCACAAGG ACTCGACGAT CATCGTCTCC AACCTTGAGG ACGCGTCGCG GGGCAAGACC TGGGTCGAGG ATCTGGGCCG CAGCGGCGAG CCGCACACCG GCAGCACGTT CATCATCGGC ACCGACAGCG GCGACTGGCT CAAGGGCGGG GCGGGCAACG ACTTCCTCGA AGGCCTGGGC GGCGATGACC GTTTCCGTGA TGACGGCGGT TTCAACATCC TGCTCGGTGG CCAGGGCCAC AATACCTTCG AGCTGCAAAA GCCGTTGCAG AACTTCAGCT TCGCCAACGA CGGCGACGGC ACGCTGTACG TGCGTGACGC CTACGGCGGC ATCAGCATGA CCCGCGACAT CGGCGCGCTA GTGAGCAAGG AGTCGGGTTC GTGGTGGGGC AGCAAGGAAA TCACCTGGAC CGTCACCGCC AAAGGCCTGG CCAACGGTGC CGAACTGACC CAGTACAACC ATTCGCTCAG CGGCGGCGCC ATGGGCGACA CCCTCAAAGC CACCGCCGAC GGCGACTGGC TGTTCGGCCT GGGCGGTAAC GATCACCTGC AAAGCGACAA GGCCCACGTG ACCTTCGTCG GCGGTGCCGG CAATGACGTG ATGAGCGCGG TGGGTGGCAA CAACACCTTC CTGTTCAGCG GCGCCTTCGG TTTTGACGCG ATCAATGGCT ACCAGGGCAG CGACAAACTG GTGTTCATGG GCGTCGAAGG CGCGGGGCAG GGCTACGACT ACAAGCAACA CGCGTCGCAG TCCGGAAGCG ATACCGTGCT GAAGATTGGC GACTTTGCCG TGACGCTGAT CGGGGTCGGT GTGGCTAACC TGTCGGATTC GAGTTTCGTC TTCGCCTGA
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Protein sequence | MGLFDYKNAD GKALYSDAIA LTLYAYTPTG QALPGTGWKP IGATALGYQG KVGVQGTFFG EKDGFTSAEA EVLGKYDAAG KLIGIGVAFR GTGGLGYSDT FGDMKNNLLA AIGPSDYATQ YAKNAFDNLL KSVAAFAVAH GIAAKDVLVS GHSLGGLGVN SVAELSASNW GGFFKDANYI SFASPTQSST GTNVLNIGYE NDPVFRVLDG TTFSTASMGK HDKPHDSTTD NIVNFNDNYA STAQNLVPFS IANPLNWSAH SSLGYADGLN RVIASKFYGL THKDSTIIVS NLEDASRGKT WVEDLGRSGE PHTGSTFIIG TDSGDWLKGG AGNDFLEGLG GDDRFRDDGG FNILLGGQGH NTFELQKPLQ NFSFANDGDG TLYVRDAYGG ISMTRDIGAL VSKESGSWWG SKEITWTVTA KGLANGAELT QYNHSLSGGA MGDTLKATAD GDWLFGLGGN DHLQSDKAHV TFVGGAGNDV MSAVGGNNTF LFSGAFGFDA INGYQGSDKL VFMGVEGAGQ GYDYKQHASQ SGSDTVLKIG DFAVTLIGVG VANLSDSSFV FA
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