Gene Pfl01_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2685 
Symbol 
ID3714360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3091193 
End bp3092881 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content63% 
IMG OID 
Producttriacylglycerol lipase 
Protein accessionYP_348416 
Protein GI77458910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.871664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000237171 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGGACTGT TCGATTACAA AAATGCCGAC GGCAAAGCGC TGTACAGCGA TGCCATCGCC 
CTGACGCTGT ATGCCTACAC GCCGACCGGG CAGGCCTTGC CCGGCACTGG CTGGAAGCCG
ATCGGCGCCA CGGCGCTGGG CTATCAGGGC AAGGTCGGGG TGCAGGGCAC GTTCTTCGGC
GAGAAGGACG GCTTCACCAG CGCCGAAGCC GAAGTGCTCG GCAAGTACGA CGCCGCGGGT
AAGCTGATCG GCATCGGCGT GGCCTTCCGC GGCACCGGCG GGCTGGGTTA CAGCGACACC
TTCGGCGACA TGAAAAACAA CCTGCTGGCT GCCATTGGCC CGTCGGACTA CGCCACTCAG
TACGCGAAAA ACGCCTTCGA CAACCTGCTC AAATCGGTGG CCGCGTTCGC TGTCGCCCAC
GGCATTGCGG CCAAGGACGT ACTTGTCAGC GGCCACAGCC TCGGCGGTCT CGGGGTCAAC
AGCGTGGCGG AGTTGAGCGC GAGCAACTGG GGCGGGTTTT TCAAGGACGC CAACTACATT
TCGTTCGCCT CGCCGACCCA GAGCAGCACC GGCACGAACG TGCTGAACAT CGGCTACGAA
AACGACCCGG TGTTCCGCGT GCTCGACGGC ACCACGTTCA GTACCGCGTC GATGGGCAAG
CACGACAAAC CGCACGATTC GACCACTGAC AACATCGTCA ACTTCAACGA CAACTACGCG
TCCACCGCGC AGAATCTGGT GCCGTTCAGC ATCGCCAACC CGCTGAACTG GTCGGCCCAC
AGCTCGCTGG GGTATGCCGA CGGCCTGAAT CGGGTGATCG CGTCGAAGTT CTACGGCCTG
ACGCACAAGG ACTCGACGAT CATCGTCTCC AACCTTGAGG ACGCGTCGCG GGGCAAGACC
TGGGTCGAGG ATCTGGGCCG CAGCGGCGAG CCGCACACCG GCAGCACGTT CATCATCGGC
ACCGACAGCG GCGACTGGCT CAAGGGCGGG GCGGGCAACG ACTTCCTCGA AGGCCTGGGC
GGCGATGACC GTTTCCGTGA TGACGGCGGT TTCAACATCC TGCTCGGTGG CCAGGGCCAC
AATACCTTCG AGCTGCAAAA GCCGTTGCAG AACTTCAGCT TCGCCAACGA CGGCGACGGC
ACGCTGTACG TGCGTGACGC CTACGGCGGC ATCAGCATGA CCCGCGACAT CGGCGCGCTA
GTGAGCAAGG AGTCGGGTTC GTGGTGGGGC AGCAAGGAAA TCACCTGGAC CGTCACCGCC
AAAGGCCTGG CCAACGGTGC CGAACTGACC CAGTACAACC ATTCGCTCAG CGGCGGCGCC
ATGGGCGACA CCCTCAAAGC CACCGCCGAC GGCGACTGGC TGTTCGGCCT GGGCGGTAAC
GATCACCTGC AAAGCGACAA GGCCCACGTG ACCTTCGTCG GCGGTGCCGG CAATGACGTG
ATGAGCGCGG TGGGTGGCAA CAACACCTTC CTGTTCAGCG GCGCCTTCGG TTTTGACGCG
ATCAATGGCT ACCAGGGCAG CGACAAACTG GTGTTCATGG GCGTCGAAGG CGCGGGGCAG
GGCTACGACT ACAAGCAACA CGCGTCGCAG TCCGGAAGCG ATACCGTGCT GAAGATTGGC
GACTTTGCCG TGACGCTGAT CGGGGTCGGT GTGGCTAACC TGTCGGATTC GAGTTTCGTC
TTCGCCTGA
 
Protein sequence
MGLFDYKNAD GKALYSDAIA LTLYAYTPTG QALPGTGWKP IGATALGYQG KVGVQGTFFG 
EKDGFTSAEA EVLGKYDAAG KLIGIGVAFR GTGGLGYSDT FGDMKNNLLA AIGPSDYATQ
YAKNAFDNLL KSVAAFAVAH GIAAKDVLVS GHSLGGLGVN SVAELSASNW GGFFKDANYI
SFASPTQSST GTNVLNIGYE NDPVFRVLDG TTFSTASMGK HDKPHDSTTD NIVNFNDNYA
STAQNLVPFS IANPLNWSAH SSLGYADGLN RVIASKFYGL THKDSTIIVS NLEDASRGKT
WVEDLGRSGE PHTGSTFIIG TDSGDWLKGG AGNDFLEGLG GDDRFRDDGG FNILLGGQGH
NTFELQKPLQ NFSFANDGDG TLYVRDAYGG ISMTRDIGAL VSKESGSWWG SKEITWTVTA
KGLANGAELT QYNHSLSGGA MGDTLKATAD GDWLFGLGGN DHLQSDKAHV TFVGGAGNDV
MSAVGGNNTF LFSGAFGFDA INGYQGSDKL VFMGVEGAGQ GYDYKQHASQ SGSDTVLKIG
DFAVTLIGVG VANLSDSSFV FA