| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2684 |
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| Symbol | |
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| ID | 3714359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3088049 |
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| End bp | 3091135 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_348415 |
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| Protein GI | 77458909 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.335444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000368637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAAACA ACAATACCCC CGCGCAATCG GGTGGAGGCT TTCGCCTGAA AACTCTCAAC
GTCGCCTTGC TCTGCGCGAT GGCCACCTGG GGCAGCGCGC ACGCGGCGCC CTACGTGGAA
AGCGGCCGGG CAGGAGATCC GGGCAGTTGG CGCAGCGCCG AATTCCAGGC TGACTGGGGC
CTGGGCGCCA TCGGTGCGGA TCACGCCTAC GCCGCCGGTT ACACCGGCAA GGGCGTGAAG
CTCGGGATCT TCGACCAGCC GGTCTACGCC GCGCACCCGG AGTTTTCCGG CAGCAACAAG
GTCATCACCC TGGTGACTTC GGGGATCCGC GAATACACCG ACCCGTACAT CCCGGTCAAA
GCCGGGGACG CATTCCGTTA TGACGGTTCG CCCTCGGTCG GTTCCGACGG CAAGCTCGGC
GCCCACGGCA CTCACGTTGG CGGTATCGCC GCCGGCAGTC GTGACGGCGG GCCGATGCAC
GGCGTGGCGT TCGGCGCGCA GATCATCAGC GCCGACAACG GCGACCCAGG CCCGGAAGAC
GGCATCGTGC GCGGCAACGA CGGCGCGGTG TACAAGGCCG GCTGGGATGC GCTGATCGCC
AGCGGCGCGC GGATCATCAA CAACAGCTGG GGCATCGGCA TCACCGACCG TTTTGACCTC
GGCGGCCGTG ACCCTGCGTA CCCGCACTTC ACCGTCAACG ACGCGCAATT GCAGTTCAAC
GAAATCCGCA CACTGCTGGG CACCAAACCC GGCGGCGCCT ACGATGGCGC AATCGCCGCT
GCACGTAGCG GGATCGTGAC GATCTTCGCG GCGGGTAACG ACTACAACCT GAACAACCCG
GATGCCATCG CCGGCCTCGG TTATTTCGTC CCGGACATCG CGCCGAACTG GATCACCGTT
GCCGCCCTGC AAAAGAACCC GGATCTGGCC AGCGCCAATC CGTACATCAT GAGTACGTTC
TCTTCGCGCT GCGGCTACAC CGCGAGTTTC TGCGTCTCGG CACCGGGCAC GAAAATCTTC
AGTTCGATCA TCGAAGGCAC CAACGCCGAC AACCTGACCA CGGGTTACAA GAACTACAAC
GGCACCTCGA TGGCCGCACC GCACGTGGCC GGCTCCATGG CAGTGCTGAT GGAGCGCTTC
CCGTACATGA CCGGCGATCA GGTCGCCAGC GTGTTGCGCA CCACGGCCAC CGACCTCGGC
GCACCGGGCA TCGACGCCCT GTACGGCTGG GGCATGATCA ACCTGCGCAA GGGCATCGAC
GGCCCGGCGA TGTTCGTCAC CGAGCAGGAC ATTCCCGAAG AGTTCCGCAT CCAGGGCGCC
TACGGCTCCG GCCAGTTCGT GGCCGATCTG CCGGGCATCG GCGCGATCAT CGATGCGGGA
AAACCCACCG AGCGCGTGTG TAACGACATC ACCTGCGGGC TCGACACCTG GCGCAACGAC
ATTTCCGGCC ATGGCGGTTT GACCAAGCAG GGCATCGGCA CCCTGGTGCT GACCGGTAAC
AACACCTACA GCGGCCCGAC CCTGGTCAAT CAGGGGCGAC TGGCAATCAA TGGCTCGCTG
CAATCGGCGG TGACAGTCAA TGACGGTGGC ATCCTCGGCG GTAACGGCCG GATCGCGGCG
CTGACCGCCA ACCGCGGCGG TACCGTGGCG CCGGGCAACT CCATCGGCAC CTTGAATGTG
GCCGGTGACG TGACCTTCGC ACCGGGTTCG ACCTATGCGG TGGAAGTGTC CCCGACCAGC
AGCGACCGGA TCGTCGCCGG CGGCAAAGCG CTGATCGAAG GCGCAACCGT GACCCTGTCG
CTGGAAAACA GCCCGACGCT GCTGACCACG GGCGAAGTGA AAAGCTTGCT CGGCACCCAG
TTCAACATCT TGCAGGCAGC GGGCGGCATT GAAGGGCAGT TCGGCCAAGT GCTGCCCGAC
TACGCGTTCC TCGGCGGCAC CCTGGCGTAC TCGGCAAGCG GTGTGCAACT GGACGTCGGC
CGTAACGGCG CCTCGTTCGC CAGTGTCGGC CTGACGCCGA ACCAGCGCGC GGTCGGCACT
GCTGCCGAAC GTCTCGGCGC CGGCAATGCG TTGTTCGAAA CCCTGTTGCT GTCGCCGTCG
GCCGCCGCTG CGCAGGATGC CTTCCAGCAA CTGTCCGGCG AGATTCACCC GGCCATCGGC
ACGCTGCTGA TCAACGACAG CCGCTACCTG CGCGATGCCG TAGGCGAACG TCTGCGTGAG
CGCGATCTGT TCGATGCCGG CGCGCCGACC GATGACCGTA GCAACGCTTG GCTCAAAGTG
CTGGGCGCCT GGGGCAAGAG CGATGGCGGG TCGAAATACG CCGATTCCAC CAGCTCCATC
GGCGGCCTGC TGGCCGGTGT CGACGGCTTG ATCGCTGAAG ATACCCGTCT GGGTTTCGTT
ACCGGCTATA GCGACAGCTC GTTGAGCATG GGCGAGGGGA CACATTCGTC CGCCTCGATC
GACAGCTATC ACCTGGGCGC CTACCTGGGG CATCAGATAG ATGCACTGCG TCTGACCGCC
GGTGCGGCTT ACAGCTGGCA TCGCATCGAC GTCAAACGCG ACCTGCAGTT CGGTGGCGTC
AGCGGCAAAC AGAAAACCAA GCGCGATGCG ACCACCGCGC AACTGTTCAC CGAAGCGGCC
TACGACCTGG GCCTGCAACC GATGAACCTG GAGCCGTTCG CCAATCTGGC CTACGTGCAC
CTCAACAGCG ACAGCTTCAC CGAGAAGGGT GATGCCGCCG CGCTGAAGGG CGGTGAAGAC
AACCGCGATG TGGTGTTGTC GACCCTCGGT GTGCGGGCCA AACGCACGTT TGCCCTGTCG
GAGAAACACC AGCTGGAACT GGGCGCAAGC CTGGGCTGGC AGCACAATCT GAGCAGCGTG
GATTCTGACA GTCACCTGGC GTTCGCCAAT GGCAATAGTG CATTCACCGT GCAAAGTGTG
TCGATGGATC GAGATGCAGC GGTGGTCGGC GTGCGCGCCG GGCTGGCGCT CAATCGCGAT
GTCCGGGTCA ACCTGGACTA CAACGGGCTG ATCGGTTCCA ACGAAAAGGA CCACGGTGTG
GGCTTGACGC TGGACTGGCA GTTCTAA
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| Protein sequence | MKNNNTPAQS GGGFRLKTLN VALLCAMATW GSAHAAPYVE SGRAGDPGSW RSAEFQADWG
LGAIGADHAY AAGYTGKGVK LGIFDQPVYA AHPEFSGSNK VITLVTSGIR EYTDPYIPVK
AGDAFRYDGS PSVGSDGKLG AHGTHVGGIA AGSRDGGPMH GVAFGAQIIS ADNGDPGPED
GIVRGNDGAV YKAGWDALIA SGARIINNSW GIGITDRFDL GGRDPAYPHF TVNDAQLQFN
EIRTLLGTKP GGAYDGAIAA ARSGIVTIFA AGNDYNLNNP DAIAGLGYFV PDIAPNWITV
AALQKNPDLA SANPYIMSTF SSRCGYTASF CVSAPGTKIF SSIIEGTNAD NLTTGYKNYN
GTSMAAPHVA GSMAVLMERF PYMTGDQVAS VLRTTATDLG APGIDALYGW GMINLRKGID
GPAMFVTEQD IPEEFRIQGA YGSGQFVADL PGIGAIIDAG KPTERVCNDI TCGLDTWRND
ISGHGGLTKQ GIGTLVLTGN NTYSGPTLVN QGRLAINGSL QSAVTVNDGG ILGGNGRIAA
LTANRGGTVA PGNSIGTLNV AGDVTFAPGS TYAVEVSPTS SDRIVAGGKA LIEGATVTLS
LENSPTLLTT GEVKSLLGTQ FNILQAAGGI EGQFGQVLPD YAFLGGTLAY SASGVQLDVG
RNGASFASVG LTPNQRAVGT AAERLGAGNA LFETLLLSPS AAAAQDAFQQ LSGEIHPAIG
TLLINDSRYL RDAVGERLRE RDLFDAGAPT DDRSNAWLKV LGAWGKSDGG SKYADSTSSI
GGLLAGVDGL IAEDTRLGFV TGYSDSSLSM GEGTHSSASI DSYHLGAYLG HQIDALRLTA
GAAYSWHRID VKRDLQFGGV SGKQKTKRDA TTAQLFTEAA YDLGLQPMNL EPFANLAYVH
LNSDSFTEKG DAAALKGGED NRDVVLSTLG VRAKRTFALS EKHQLELGAS LGWQHNLSSV
DSDSHLAFAN GNSAFTVQSV SMDRDAAVVG VRAGLALNRD VRVNLDYNGL IGSNEKDHGV
GLTLDWQF
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