Gene Pfl01_2640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2640 
Symbol 
ID3714281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3021803 
End bp3023113 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content61% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_348371 
Protein GI77458865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.932575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCA CTGCAAAAGC TCTGCTGGCC CTCACCTGCA TGACCCTCAG CAGCGTCAGC 
CTTGGCGCCC AGACCCTGAC CATCGCCACC GTCAATAACA GCGACATGAT CCGCATGCAA
AAGCTCTCGA AAACCTTCGA GACCGAGCAT CCGGACATCA AGCTCAATTG GGTGGTGCTG
GAAGAAAACG TCCTGCGTCA GCGCCTGACC ACCGACATCG CCACCCAGGG CGGTCAGTTC
GACGTGTTGA CCATCGGCAT GTACGAAGCC GCACTCTGGG GTGCCAAGGG TTGGCTGGAG
CCGATGAAGG ATCTGCCGGC CAGCTACGCC CTCGATGATG TGTTCCCGTC CGTACGCGAA
GGCCTGTCAG TCAAGGGTTC GCTGTACGCC CTGCCGTTTT ACGCCGAGAG CTCGATCACC
TACTACCGCA CCGACCTGTT CAAGGACGCC GGCCTGACCA TGCCGGAGCG TCCGACCTGG
GAGCAGATCG CCGGCTTCGC CGAGAAACTC ACCAATAAGG ACAAGGAACA ATACGGCATC
TGCCTGCGTG GCAAGGCCGG CTGGGGCGAG AACATGGCGC TGATCACCAC CGTGGCCAAC
GCCTATGGCG CGCGCTGGTT CGATGAGCAA TGGAAACCGG AATTCAGCGG TCCGGAATGG
AAAAACGCGC TGAACTTCTA TGTCGACACC ATGAAGAAAT CCGGCCCGCC GGGCGCCTCC
AGCAACGGTT TCAACGAGAA CCTCGCCCTG TTCAACAGCG GCAAATGCGC GATCTGGGTC
GATGCCAGCG TCGCCGGCTC GTTCGTCACC GACAAGACCC AAAGCAAGGT CGCCGATCAC
GTCGGCTTCA CCTACGCGCC GCATCAGGTC ACCGACAAAG GCTCGGCCTG GCTGTACTCG
TGGGCGCTGG CGATTCCGAC CAGCTCCAAG GCCAAGGACG CCGCCAAGCA ATTCAGCGCC
TGGGCTACCT CCAAAGAGTA CGGCGAACTG GTCGCCAAGA CCGACGGCAT CGCCAACGTT
CCGCCGGGCA CCCGCGCCTC GACCTACAGC GACGCTTACA TGAGCGCCGC ACCGTTTGCC
AAGGTCACGC TGGAATCGCT GAAAGCGGCC GATCCGAGCA AACCGACCTT CAAACCCGTG
CCGTACATCG GCATTCAACT GGTGACCATT CCCGAGTTTC AGGGGATCGG CACACAGGTC
GGCAAGCTGT TCTCCGCCGC ACTGATCGGC CAGACCACGG TCGACCAAGC GCTGACCGCC
GCCCAGCAAA CCACCGAACG CGAGATGAAG CGCGCGGGTT ATCCGAAGTA A
 
Protein sequence
MQPTAKALLA LTCMTLSSVS LGAQTLTIAT VNNSDMIRMQ KLSKTFETEH PDIKLNWVVL 
EENVLRQRLT TDIATQGGQF DVLTIGMYEA ALWGAKGWLE PMKDLPASYA LDDVFPSVRE
GLSVKGSLYA LPFYAESSIT YYRTDLFKDA GLTMPERPTW EQIAGFAEKL TNKDKEQYGI
CLRGKAGWGE NMALITTVAN AYGARWFDEQ WKPEFSGPEW KNALNFYVDT MKKSGPPGAS
SNGFNENLAL FNSGKCAIWV DASVAGSFVT DKTQSKVADH VGFTYAPHQV TDKGSAWLYS
WALAIPTSSK AKDAAKQFSA WATSKEYGEL VAKTDGIANV PPGTRASTYS DAYMSAAPFA
KVTLESLKAA DPSKPTFKPV PYIGIQLVTI PEFQGIGTQV GKLFSAALIG QTTVDQALTA
AQQTTEREMK RAGYPK