Gene Pfl01_2632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2632 
Symbol 
ID3714273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3012598 
End bp3013899 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content59% 
IMG OID 
Productouter membrane porin 
Protein accessionYP_348363 
Protein GI77458857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCCC CATTTCCCCT CATCACCCCG CGCCAGTCGC TTGGCTTCGG AGCCTTTGTG 
CTGTGCGCCG GTTTTACCGC ACAGGTCCAG GCCAGCGGTT TTTTCGAAGA CACCACGGCG
AAGATCGAGT CGCGCACGGT GTACTTCAAC CGCGATTTCC GTGACGGGCA CACCTCCAGT
GATCAGGGCG CGTCCAAGCG CGAAGAGTCG GCGCAGGGTT TCATTCTCAA TCTGCAATCG
GGCTACACCG AAGGCACCGT CGGTTTCGGG ATCGATGCGC TGGGCATGGC GGGATTCCAG
CTCGATTCCA GCCCGGATCG CAGCAACAGC GGCTTGTTGC CGTCCAGCGG CGACAACCCG
CGCGGCTCGA AAGGTCAGTA CGCGAAAATG GGCCTGACCG CCAAGGTCAA AGTCTCGGAC
ACGGTGCTGA AATACGGCGC ACTGCTGCCG GATCTGCCGT TGCTCAAGTA CAACGACGGT
CGCCTGCTGC CGACCATGTT CAACGGTGCG ATGCTGACCT CCAAAGAGGT GAAGGACCTG
ACCTTCATGG CCGCGCGTCT GGACAAGTAC ACCGCCCGGG ACTCGAGCGA TTCGCAAGAC
ATCCGCGTGC ACTGCAAGAA CAAGCGCTAT GCCTGCAACA CCACCGCCGA TCATTTCGAC
ATGTACGGCT TCGACTACAA GATCAACGAT CGCCTGACCG CGCAGTACCA CTACGCCGAG
CTGGAAGACA TCTATCGCCA GCATTTCGTG GGGCTGTTGG CCAATCAGCC GCTGGGTGAC
GGCGTGTTGA AAGCCGATCT GCGTTTGCTG AAAAGCGCCG ACAGCGGCGA TGCCAAAGCG
GGCTCCATCG ACAACCGCGC CTTGAGCGGC ATGCTGTCAT ACGGCATCAG CGGTCACACC
TTCAGCGCAG GCTGGCAGCG CATGAACGGC GACAATTCGA TGCCGTATCT GGATGGCAGC
AACCCGTATC TGGTGAACTA CGTGCAGGTC AACGACTTCG CCGCCGCGCA GGAACGTTCC
TGGCAGTTGC GTTACGACTA TGACTTCAAG GCGATCGGCA TCAACGGCCT GAGCTTCCTG
ACCCGTTACG TGAACGGTGA TCACATCAAA GTTCCGGGCA GCGATCAGGA AGGCAAAGAG
TGGGAACGCG ACAGCGAGTT GAAGTACGTG ATTCAGAGCG GCACGTTCAA GGACGTCAGC
CTGCGTTTGC GTAATGCGAC GTACCGGACG AACTACGAGA AGTTTGCCCG GGACGTGGAT
GAGACCCGGT TGATTGTGAG TTACAACTTT TCGGTGTTGT AA
 
Protein sequence
MRPPFPLITP RQSLGFGAFV LCAGFTAQVQ ASGFFEDTTA KIESRTVYFN RDFRDGHTSS 
DQGASKREES AQGFILNLQS GYTEGTVGFG IDALGMAGFQ LDSSPDRSNS GLLPSSGDNP
RGSKGQYAKM GLTAKVKVSD TVLKYGALLP DLPLLKYNDG RLLPTMFNGA MLTSKEVKDL
TFMAARLDKY TARDSSDSQD IRVHCKNKRY ACNTTADHFD MYGFDYKIND RLTAQYHYAE
LEDIYRQHFV GLLANQPLGD GVLKADLRLL KSADSGDAKA GSIDNRALSG MLSYGISGHT
FSAGWQRMNG DNSMPYLDGS NPYLVNYVQV NDFAAAQERS WQLRYDYDFK AIGINGLSFL
TRYVNGDHIK VPGSDQEGKE WERDSELKYV IQSGTFKDVS LRLRNATYRT NYEKFARDVD
ETRLIVSYNF SVL