Gene Pfl01_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2617 
Symbol 
ID3714258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2995232 
End bp2996806 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348348 
Protein GI77458842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.437395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCGG TACAGGGTCA TTGGCGCGAA GTATCCAGTC AAAGTTTGCC GCCGGCAACT 
TATTTAAAAC CGCAGATCAG AACTTTAAGT CAAGTGTTGA TCATCGTCGA ACGCAAGGAA
GACTGGGCCT CGTACTTCCC CAGCGAAGAC ATCCTGACGG CCCAGGAATA CCTCGAACAA
CCTCCCGACA GCGAGCCGGG AAAACGGGTG CAGGTGATCA ACCTGTGCCG CAGCTACAAG
TACTTGGGCC ACGGCTACTA CTGCTCGCTG CTGGCTGAAG CCCGAGGGCA CAAGGTGATT
CCGTCGGTAC GCACCATCAG CGAACTGACG CGAAAATCCC TTTACGGCCT GGCACTGGAT
GACCTGGATA AAACCCTGGA AAAAGCCCTG AGCCATCATC TCTACAGCGA CACCGAAGGT
TTTACGCTGA CACTTTATTT CGGCAGAACC CATATCGAGC CGTTGCAGGA TCTGGCCCGG
CAATTGTTTG AAGTGTTTCC ATGTCCGATT CTGTTAGTTG AATTCCGTCG AACTAACGGC
TGGCACATCG AAGGTATAAA ATCCGGCGCC TTGCACAAGT TGCGCGACGA TCAGGAAGAT
CAGTTCGCCA ATGCGCTGGA CGGCTTCAGT CGCAAGATCT GGCGTGTTCC GCGTTCGCCA
CAAGTGGCGC GTTATGACTT GGCGATCCTG CATGATCCGC AGGAGGCGTT GCCGCCGTCC
AACGCCCGGG CACTGGAAAA CTTTGTGCGG GTCGGCAAGG GCATGGGCAT CGATGTCGAG
CTGATCGAAC GCAAGGACTA CGCAAGGCTG GCCGAGTACG ACGGCTTGCT GATCCGCGAG
ACCACCAGCG TCGACAACCA CACTTACCGC TTCGCCAAGA AAGCCGAAAG CGAAGGGCTG
GTGGTGATGG ACGACCCGAC GTCGATCCTG CGCTGCACCA ACAAGGTCTA CCTCACCGAC
CTGCTCAACA GCCATCAACT GGGCATGCCG GCCACGGAGA TTCTCTACAA GGAGCGACCC
GAAGACTTCG AACGGGTCGG CGAGCGTCTC GGTTTTCCGC TGGTACTGAA GATCCCCGAT
GGCTGTTTCT CCCGTGGCGT GATCAAGGTC GAGAGCCAAC AGGCCTTGCT GGAGGCCACT
GCCGAACTGT TCGAACACTC GGTGCTGTTG CTGGCCCAGG AATTTTTCTA CACCGAGTAC
GACTGGCGCA TCGGCGTGCT CAACCGCAAA CCGATCTTTG CCTGCCAGTA CTTCATGTCC
AAGGGGCATT GGCAGATCTA CAACCACAAG GCCAAGGGCC AGGATGTCAA CGGCGAATGC
CGCACGCTGG CGATCCACGA AGCGCCGCGC GCAGTGGTGG AACTGGCGGT GAAGACCGCC
AACCTGATCG GCGACGGCTT GTACGGTGTT GACCTGAAAC AGGCCGGCGA CAAGGTGGTG
GTGATCGAGG TCAACGACAA CCCGAACCTC GACGCCGGCA TCGAAGACGC CTACCTGCAG
GACGACCTGT ATTCGCTGGT ACTGGAAGAG TTCGTGCGGC GTCTCGAACT CAAACGCCGC
GGGCAGGCCT GGTGA
 
Protein sequence
MSAVQGHWRE VSSQSLPPAT YLKPQIRTLS QVLIIVERKE DWASYFPSED ILTAQEYLEQ 
PPDSEPGKRV QVINLCRSYK YLGHGYYCSL LAEARGHKVI PSVRTISELT RKSLYGLALD
DLDKTLEKAL SHHLYSDTEG FTLTLYFGRT HIEPLQDLAR QLFEVFPCPI LLVEFRRTNG
WHIEGIKSGA LHKLRDDQED QFANALDGFS RKIWRVPRSP QVARYDLAIL HDPQEALPPS
NARALENFVR VGKGMGIDVE LIERKDYARL AEYDGLLIRE TTSVDNHTYR FAKKAESEGL
VVMDDPTSIL RCTNKVYLTD LLNSHQLGMP ATEILYKERP EDFERVGERL GFPLVLKIPD
GCFSRGVIKV ESQQALLEAT AELFEHSVLL LAQEFFYTEY DWRIGVLNRK PIFACQYFMS
KGHWQIYNHK AKGQDVNGEC RTLAIHEAPR AVVELAVKTA NLIGDGLYGV DLKQAGDKVV
VIEVNDNPNL DAGIEDAYLQ DDLYSLVLEE FVRRLELKRR GQAW