Gene Pfl01_2538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2538 
Symbol 
ID3714081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2905174 
End bp2905956 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content60% 
IMG OID 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_348269 
Protein GI77458763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.446377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAGCG ATCCCAAGCG TCACGTCGTC GACGCGCCAG TCATTCACCG CCTGCGGGTA 
TTGACGGTCA ATACGCACAA GGGTTTCACC GCGCTCAATC GACGTTTCAT CCTTCCGGAA
CTGCGTGAAG CGGTGCGCAG CACCTCGGCG GATCTGGTGT TTCTGCAGGA AGTGGTGGGC
GAACACGAGC GCCATTCCAG TCGCTACCAC GAATGGCCGC AAACCTCGCA GTACGAATTC
CTCGCCGACA GCATGTGGAG TGATTTTGCC TACGGTCGCA ATGCGGTGTA TCCCGACGGC
CATCACGGCA ATGCGCTGTT GTCGAAATAC CCGATCCGCG AGTACCGCAA CCTCGATGTT
TCGATCACAG GTCCCGAACG GCGCGGGCTG TTGCACTGCG TACTGGATGT ACCGGGGCAT
GCCGAAGTAC ATGCCATCTG CGTACACTTG AGCCTGCTCG AAAGCCATCG GCAATTGCAG
TTGCAGCTGC TCTGCCAGTT GCTCGAATCC CTGCCCGACA ATGCTCCGGT GATCATCGCC
GGCGACTTCA ATGACTGGCA GTTGCAGGGC AACGTCGCCC TTGCCCGCCG CGACTACCTG
CACGAAGCCT TCGAACGCCA TCACGGCCGC CCGGCCAAGA CCTACCCCGC GCGGTTCCCG
TTGCTGCGAC TCGACCGGGT TTATCTGCGC AATGCCAGCA GTCATAACCC GCAGATCCTC
GGCAACAAGC CGTGGACGCA TCTCTCGGAT CATTTGCCGC TGGCGGTTGA AGTGCATTTG
TAG
 
Protein sequence
MSSDPKRHVV DAPVIHRLRV LTVNTHKGFT ALNRRFILPE LREAVRSTSA DLVFLQEVVG 
EHERHSSRYH EWPQTSQYEF LADSMWSDFA YGRNAVYPDG HHGNALLSKY PIREYRNLDV
SITGPERRGL LHCVLDVPGH AEVHAICVHL SLLESHRQLQ LQLLCQLLES LPDNAPVIIA
GDFNDWQLQG NVALARRDYL HEAFERHHGR PAKTYPARFP LLRLDRVYLR NASSHNPQIL
GNKPWTHLSD HLPLAVEVHL