Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2538 |
Symbol | |
ID | 3714081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2905174 |
End bp | 2905956 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_348269 |
Protein GI | 77458763 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.446377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCAGCG ATCCCAAGCG TCACGTCGTC GACGCGCCAG TCATTCACCG CCTGCGGGTA TTGACGGTCA ATACGCACAA GGGTTTCACC GCGCTCAATC GACGTTTCAT CCTTCCGGAA CTGCGTGAAG CGGTGCGCAG CACCTCGGCG GATCTGGTGT TTCTGCAGGA AGTGGTGGGC GAACACGAGC GCCATTCCAG TCGCTACCAC GAATGGCCGC AAACCTCGCA GTACGAATTC CTCGCCGACA GCATGTGGAG TGATTTTGCC TACGGTCGCA ATGCGGTGTA TCCCGACGGC CATCACGGCA ATGCGCTGTT GTCGAAATAC CCGATCCGCG AGTACCGCAA CCTCGATGTT TCGATCACAG GTCCCGAACG GCGCGGGCTG TTGCACTGCG TACTGGATGT ACCGGGGCAT GCCGAAGTAC ATGCCATCTG CGTACACTTG AGCCTGCTCG AAAGCCATCG GCAATTGCAG TTGCAGCTGC TCTGCCAGTT GCTCGAATCC CTGCCCGACA ATGCTCCGGT GATCATCGCC GGCGACTTCA ATGACTGGCA GTTGCAGGGC AACGTCGCCC TTGCCCGCCG CGACTACCTG CACGAAGCCT TCGAACGCCA TCACGGCCGC CCGGCCAAGA CCTACCCCGC GCGGTTCCCG TTGCTGCGAC TCGACCGGGT TTATCTGCGC AATGCCAGCA GTCATAACCC GCAGATCCTC GGCAACAAGC CGTGGACGCA TCTCTCGGAT CATTTGCCGC TGGCGGTTGA AGTGCATTTG TAG
|
Protein sequence | MSSDPKRHVV DAPVIHRLRV LTVNTHKGFT ALNRRFILPE LREAVRSTSA DLVFLQEVVG EHERHSSRYH EWPQTSQYEF LADSMWSDFA YGRNAVYPDG HHGNALLSKY PIREYRNLDV SITGPERRGL LHCVLDVPGH AEVHAICVHL SLLESHRQLQ LQLLCQLLES LPDNAPVIIA GDFNDWQLQG NVALARRDYL HEAFERHHGR PAKTYPARFP LLRLDRVYLR NASSHNPQIL GNKPWTHLSD HLPLAVEVHL
|
| |