| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2524 |
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| Symbol | |
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| ID | 3712097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2885554 |
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| End bp | 2887023 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_348255 |
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| Protein GI | 77458749 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.670028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.773524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGACC GTTCGCTTAT CAATCTGGCT ACCGTTCGCG GCTCGCGTCT GCTGAGCCTG
TCGCTGTGCG TGGCGATGCT CAGTGCCTGC GCCGTCGGCC CGGACTACCA GCGCCCGCAG
ACCGCCGAAA TCGCCCAGTA CAAGGAAGCC GAAGGCTGGC GTCAGGCCAA TCCGAGCGAT
TCCCTGGCGC GTGGTGCCTG GTGGGAGCTG TATGGCGATC GTCAGCTCAA CCAGCTGATC
GAGAAACTCA ACAGTTCGAA CCAGACCGTC GCCCAGTCCG AGGCCCAGTA CCGTCAGGCC
CAGGCGTTGG TACGCAGTGC ACGCGGGGCG TTTTATCCGA GCGTCGATCT GAGTGCCGGC
AAGACCCGCT CCAGCCAGGG CACCGGCAGC AGCAGTTCGA GTCTGAGCAG TTCCTCCAGC
GGCATTCGTG ACACGTACAA CGCGCAACTG GGCGTGAGTT GGGAAGCGGA TGTCTGGGGC
AAGTTGCGTC GGGGCCTGGA AGCCAATGAA GCCAGTGCCC AGGCGAGCTA CGCCGATCTG
GCGGCGATGC GTCTGAGCCA GCAGTCGGAA CTGGTGCAGA ACTACCTGCA ACTGCGAGTG
ATTGATCAGC AGAAACGCCT GCTCGAATCG ACAGTGGCGG CGTACGAGCG CTCGCTGAAG
ATGACCATGA ACCAGTACAA CGCCGGGGTT TCCGGACGTG ATGCGGTGGC GCAGGCGCAG
ACCCAGCTGA AAACCACCCA GGGCGATCTG GTGGACCTGA TCTGGCAACG GGCGCAGTTC
GAAAACGCCA TCGCGGTACT GACCGGCCAG CCGCCCGCTG AATTCAACAT TGCCGAAACT
CAGGACATTC CCAAGCTGCC GCAGATTCCA CTGAGCCTGC CGTCGCAGTT GCTCGAGCGC
CGTCCGGACA TCGCCTCGGC CGAGCGCTCG GTGATCGCCG CCAACGCCAA CATCGGCGTG
GCCAAGGCTG CGTATTACCC GGATTTCAGC CTGAGCATGA GCGGCGGTTA CAGCAGCAGT
ACCTCGCAGA ACCTGATCAG CCTGCCGAAC CGCTTCTGGT CGGTGGGGCC GAAAATGACC
CTGCCGCTGT TTGACGGCGG CATTCGTTCG GCCGAAGTCG ACCGCACCGA AGCCGTGTAC
GACCAGACCG TGGCCAAATA CCGCCAGACT GTGCTCGATG GTTTCCGCGA AGTGGAAAAC
TATCTGGTGC AGTTGAAGGT TTACGAAGAT GAAGCGGCCG TGCGCCAGGA AGCCCTCGAC
GCGGCACGGG ATTCGTTGCG TCTGACCGAG AACCAGTACA AGGCCGGGGT GATTGCTTAT
CTCGATGTAG TGACGGTGCA GGCGACGGCG CTGAGCAATG AACGCACGGT GCTGAATATC
CTGCAGAGCC GTTTGATTGC CAGTGTGCAG CTGATTGCGG CGCTGGGTGG TGGCTGGGAC
GGGCAGCTGG AAACCACTGA TAACCGCTGA
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| Protein sequence | MTDRSLINLA TVRGSRLLSL SLCVAMLSAC AVGPDYQRPQ TAEIAQYKEA EGWRQANPSD
SLARGAWWEL YGDRQLNQLI EKLNSSNQTV AQSEAQYRQA QALVRSARGA FYPSVDLSAG
KTRSSQGTGS SSSSLSSSSS GIRDTYNAQL GVSWEADVWG KLRRGLEANE ASAQASYADL
AAMRLSQQSE LVQNYLQLRV IDQQKRLLES TVAAYERSLK MTMNQYNAGV SGRDAVAQAQ
TQLKTTQGDL VDLIWQRAQF ENAIAVLTGQ PPAEFNIAET QDIPKLPQIP LSLPSQLLER
RPDIASAERS VIAANANIGV AKAAYYPDFS LSMSGGYSSS TSQNLISLPN RFWSVGPKMT
LPLFDGGIRS AEVDRTEAVY DQTVAKYRQT VLDGFREVEN YLVQLKVYED EAAVRQEALD
AARDSLRLTE NQYKAGVIAY LDVVTVQATA LSNERTVLNI LQSRLIASVQ LIAALGGGWD
GQLETTDNR
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