Gene Pfl01_2520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2520 
Symbol 
ID3712093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2877369 
End bp2877869 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content60% 
IMG OID 
Productthiol peroxidase (atypical 2-Cys peroxiredoxin) 
Protein accessionYP_348251 
Protein GI77458745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0980441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAG TCACGCTCAA AGGCAACCCG GTTCAAGTCA ACGGCCAACT GCCACAAGCC 
GGTTCCAAGG CGCCAGCCTT TTCCCTGGTA GCCGGCAATC TGTCCGACGT CACCCTGAAA
GACTTCGCCG GCAAGCGCAA AGTGCTGAAC ATCTTCCCAA GCGTCGACAC CCCGACCTGC
GCCACTTCCG TGCGCAAGTT CAACGCCCAG GCCAACGACA TCAGCAACAC CGTGGTGCTG
TGCATCTCGG CTGACCTGCC GTTCGCCCAG GCTCGCTTCT GCGGCGCCGA AGGCCTGGAA
AACGTACAAA ACCTGTCGAC CCTGCGCGGC ACCGAGTTCC TCGAGAACTA CGGCGTGGCC
ATCGCTGACG GCCCGCTGAA AGGCCTGACC GCCCGTGCGG TGGTTGTTCT GGACGAAAAC
GACAACGTCC TGCACAGCGA ACTGGTCAAG GAAATTGCAG AAGAGCCTAA CTACGAAGCG
GCACTGTCCG TTCTGAAATA A
 
Protein sequence
MAQVTLKGNP VQVNGQLPQA GSKAPAFSLV AGNLSDVTLK DFAGKRKVLN IFPSVDTPTC 
ATSVRKFNAQ ANDISNTVVL CISADLPFAQ ARFCGAEGLE NVQNLSTLRG TEFLENYGVA
IADGPLKGLT ARAVVVLDEN DNVLHSELVK EIAEEPNYEA ALSVLK