Gene Pfl01_2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2485 
Symbol 
ID3715265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2840984 
End bp2844073 
Gene Length3090 bp 
Protein Length1029 aa 
Translation table11 
GC content60% 
IMG OID 
Productacriflavin resistance protein 
Protein accessionYP_348216 
Protein GI77458710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000175334 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.956638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG GACGATTCAA CCTTTCCGCC ATCGCCGTTC GCGAGCGGGC GATCACGGTC 
TTTCTGATTT TCCTGATTGC CGTTGCCGGC ACCCTGGCGT TCTTCCAGTT GGGGCGTGCC
GAAGACCCTC CATTTACCGT CAAGCAGTTG ACCGTCATCA CGGCATGGCC GGGGGCGACC
GCACAGGAGA TGCAGGATCA GGTCGCGGAG CCACTGGAAA AACGCCTGCA AGAACTCAAA
TGGTACGACC GCTCGGAAAC CTATACGCGG CCAGGGCTCG CTTTCACGAT GGTCTCGTTG
CTCGATAGCA CGCCGCCTTC GCAAGTGCAG GAAGAGTTCT ATCAGGCGCG TAAAAAACTT
GACGATGAAG CCATCAAGTT GCCGGCGGGC GTCATCGGGC CGATGGTCAA CGACGAATAT
TCGGACGTGA CCTTTGCGCT GTTCGCCCTG AAAGCCAAGG GCGAGCCACA GCGTCTGCTG
GTACGCGATG CGGAGTCCAT GCGCCAGCGC CTGTTGCATG TGCCGGGGGT AAAGAAGGTC
AATATCATCG GCGAACAAGC CGAACGGATA TTTGTTTCTT TCTCCCATGA GCGGTTGGCG
ACCCTGGGCT TGTCGCCGCA GGACATCTTC GCCGCGCTGA ACAGCCAGAA CGCACTGACC
CCGGCCGGAT CAATCGACAC CAGCGGGCCA CAGGTTTTTC TGCGTCTCGA TGGTGCGTTC
GACAAACTGC AGAAAATCCG CGACACCCCT GTGGTCCTGC AAGGGCGGAC ACTCAAGCTG
TCTGATGTGG CGACGGTCGA ACGCGGTTAT GAAGACCCGG CCACCTTTAT GGTGCGCAAT
AACGGTGAAG AGGCGCTGTT GCTCGGCGTG GTGATGCGCG AGGGCTGGAA CGGTCTTGAT
CTGGGCAAGG CGCTGGATGC CGAGATCGTC AGGATCAATG AGGAAATGCC CTTGGGTATG
ACCCTCTCGA AAGTCACCGA CCAGGCAGTG AATATCGACT CCGCTGTCGG CGAGTTCATG
GTCAAGTTCT TCGTCGCGCT GCTGGTGGTC ATGCTCGTCT GCTTTCTGAG CATGGGCTGG
CGTGTCGGCG TGGTGGTCGC CGCTGCCGTA CCTTTGACCC TGGCGATCGT GTTTGTGGTG
ATGGCGGCCA CCGGCAAGAA TTTCGACCGT ATTACCCTCG GGTCATTGAT CCTGGCGCTT
GGTTTGCTGG TCGACGATGC GATCATTGCC ATTGAGATGA TGGTGGTGAA AATGGAGGAG
GGCTACGATC GCATCAAGGC GTCTGCCTAT GCCTGGAGCC ACACGGCGGC GCCGATGCTG
TCCGGAACCC TGGTGACGGC GATCGGTTTT TTGCCGAACG GTTTCGCTCA GTCCACGGCC
GGCGAATACA CCAGCAACAT GTTCTGGATC GTGGGCATCG CTCTCATCGC CTCGTGGGTC
GTCGCAGTGG CGTTCACCCC TTATCTGGGC GTGAAACTCT TGCCGGACAT CAAGGCTGTG
GAGGGTGGAC ACGCGGCGAT CTACAACACG CCGCGATACA ACCGTTTTCG CCGGGTTCTG
ACCCGGGTCA TTGCACGCAA ATGGTGGGTC GCAGGCATGG TCATTGCGCT GTTCTTCGTG
GCCGCTGCGG GCATGGGCCT GGTGAAGAAA CAGTTCTTCC CGACCTCTGA CCGTCCTGAA
GTCATGATCG AAGTGCAAAT GCCCTACGGC ACTTCCATCG AGCAGACCAG CGCCACGGCC
GCCAAGGTCG AAGCCTGGTT GCGCCAGCAG GAGGAGGCAA AAATCGTCAC GGCCTATATC
GGCCAGGGTG CACCGCGTTT CTTCCTGGCG ATGGCGCCCG AACTGCCCGA TCCGTCGTTC
GCCAAGATCG TGGTGCTGAC CGACAGTCAG GAGGCACGAG AAACCCTCAA GTTGCGTTTT
CGTGACGCGG TGGCTCAAGG GCTTGCCCCT GAGGCGCGCC TCAGGGCATC GCAGATTGTG
TTTGGTCCTT ATTCGCCATT TCCAGTGGCT TACCGGGTGA TGGGGCCTGA TCCGGCGAAG
TTGCGCGTAA TCGCCGAGCA GGTGCGGAGC GTGATGCAGG ACAGCCCGAT GATGAGAACC
GTGAACACTG ATTGGGGGCC GCTGACGCCG TCGTTGCATT TCAACCTGGA TCAGGACCGT
CTACAGGCAG TGGGGCTGAC ATCGACTGCG GTTGCACAGC AATTGCAGTT CCTGCTCAGC
GGAGTACCGA TTACGGCGGT GCGTGAAGAT ATCCGTTCGG TACAGGTGAT GGGGCGGGCA
GCGGGCGATA TCCGGCTCGA TCCGCAGCAA ATCGAAGGCT TCACCTTGGT CGGTGCGTCG
GGACAGCGAA TCCCGTTGTC GCAGATCGGC GAGGTCGATG TGCGCATGGA GGATCCGATC
CTGCGCCGGC GTGATCGCAC CCCGACCATC ACCGTGCGCG GCGACATTGC CGAGGACTTG
CAGCCACCGG ATGTTTCCAA TGCGCTGCTG AAGCAACTGC AGCCGATCAT CGAGAAGCTG
CCTTCCGGTT ACCGGATCGA GCAGGCGGGC GCGATCGAAG AATCCGGCAA GGCCGGCAAG
GCGATCCTGC CGTTGTTGCC GATCATGATC GCCATGACCC TGGTCATCAT CATTGTGCAG
GTCCGTTCGA TCTCGGCGAT GATCATGGTG TTCCTGACCT CGCCGTTAGG CTTGATAGGC
GTGGTGCCGA CACTGCTCAT CTTCAATCAG CCGTTTGGCA TCAATGCGCT GGTCGGGTTG
ATTGCACTGT CGGGGATCCT GATGCGCAAT ACGCTGATTC TGATCGGCCA GATTCATCAC
AACGCGCAAG AAGGGCTGGA TCCGTTTCAC GCTGTCGTCG AAGCCACGGT GCAACGTGCG
CGACCGGTAC TGTTGACGGC CCTGGCGGCA ATCCTGGCGT TCATTCCCCT GACGCACTCG
GTATTTTGGG GGACGCTGGC CTATACCCTG ATTGGCGGTA CGCTCGTCGG CACCGTCATG
ACGCTGGTGT TCCTGCCCGC GATGTACTCG ATCTGGTTCA AAATCGGTCC TGACGCCAGG
CCGCCGGCTG CAACAGTCAA ACCGGAGTAG
 
Protein sequence
MSEGRFNLSA IAVRERAITV FLIFLIAVAG TLAFFQLGRA EDPPFTVKQL TVITAWPGAT 
AQEMQDQVAE PLEKRLQELK WYDRSETYTR PGLAFTMVSL LDSTPPSQVQ EEFYQARKKL
DDEAIKLPAG VIGPMVNDEY SDVTFALFAL KAKGEPQRLL VRDAESMRQR LLHVPGVKKV
NIIGEQAERI FVSFSHERLA TLGLSPQDIF AALNSQNALT PAGSIDTSGP QVFLRLDGAF
DKLQKIRDTP VVLQGRTLKL SDVATVERGY EDPATFMVRN NGEEALLLGV VMREGWNGLD
LGKALDAEIV RINEEMPLGM TLSKVTDQAV NIDSAVGEFM VKFFVALLVV MLVCFLSMGW
RVGVVVAAAV PLTLAIVFVV MAATGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKMEE
GYDRIKASAY AWSHTAAPML SGTLVTAIGF LPNGFAQSTA GEYTSNMFWI VGIALIASWV
VAVAFTPYLG VKLLPDIKAV EGGHAAIYNT PRYNRFRRVL TRVIARKWWV AGMVIALFFV
AAAGMGLVKK QFFPTSDRPE VMIEVQMPYG TSIEQTSATA AKVEAWLRQQ EEAKIVTAYI
GQGAPRFFLA MAPELPDPSF AKIVVLTDSQ EARETLKLRF RDAVAQGLAP EARLRASQIV
FGPYSPFPVA YRVMGPDPAK LRVIAEQVRS VMQDSPMMRT VNTDWGPLTP SLHFNLDQDR
LQAVGLTSTA VAQQLQFLLS GVPITAVRED IRSVQVMGRA AGDIRLDPQQ IEGFTLVGAS
GQRIPLSQIG EVDVRMEDPI LRRRDRTPTI TVRGDIAEDL QPPDVSNALL KQLQPIIEKL
PSGYRIEQAG AIEESGKAGK AILPLLPIMI AMTLVIIIVQ VRSISAMIMV FLTSPLGLIG
VVPTLLIFNQ PFGINALVGL IALSGILMRN TLILIGQIHH NAQEGLDPFH AVVEATVQRA
RPVLLTALAA ILAFIPLTHS VFWGTLAYTL IGGTLVGTVM TLVFLPAMYS IWFKIGPDAR
PPAATVKPE