Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2478 |
Symbol | |
ID | 3715296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2833237 |
End bp | 2834025 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_348209 |
Protein GI | 77458703 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTC GCCCTACTGT TCTCATCACT GGCGCCTCTA CCGGCATTGG CGCCGTCTAT GCCGAACGCT TCGCCAAACG TGGTCACGAT CTGGTACTGG TCGCCCGCGA TCAGGCCCGC CTGGACACAC TGGCAGCGCG CCTGCGCAGC GAGCACGACG TCGCCGTCGA TGTCATCCCG GCAGACCTGA CCCAACTCGC CGATCTGACC ACCGTTGAAA GCCGCCTGCG CGACGACGCC CGCATCGGCA TTCTCGTCAA TAACGCCGGC GCCGCGCTGT CCGGCCACTT CGTCGACCAA AGCACCGACA GCGTCGCGCA ACTGGTGGCC CTCAACACCA CGGCGCTGGT GCGGCTCGCC AGCGCCATCG CCCCACGCCT GGCCAAGGCC GGCGACGGCG CAATCATCAA CATCGGTTCG GTGGTAGGCC TGGCGCCGGA GTTCGGCATG AGCGTCTACG GTGCGACCAA GGCCTTCGTG CTGTTCCTGT CCCAGGGCCT GAGCCTGGAA CTCTCGCCGC AGGGCGTCTA CGTGCAAGCC GTGCTACCCG CCGCCACCCG CACGGAAATC TGGGATCGCT CCGGCGTCGA CATCAACACC CTGAGCGAAA TCATGGAAGT GGGTGATCTG GTGGATGCCG CACTGGTCGG TTTTGATCGT CGCGAACCTG TGACCATCCC GCCGCTGCAC GAAGCCGAGC GCTGGGATGA CCTGCAGGGC GCACGCCAGG GCCTGCTGGG ACAAATCCGC CAGTCTGCGG TTGCCCAGCG CTATCAGACG CCACAGTGA
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Protein sequence | MSTRPTVLIT GASTGIGAVY AERFAKRGHD LVLVARDQAR LDTLAARLRS EHDVAVDVIP ADLTQLADLT TVESRLRDDA RIGILVNNAG AALSGHFVDQ STDSVAQLVA LNTTALVRLA SAIAPRLAKA GDGAIINIGS VVGLAPEFGM SVYGATKAFV LFLSQGLSLE LSPQGVYVQA VLPAATRTEI WDRSGVDINT LSEIMEVGDL VDAALVGFDR REPVTIPPLH EAERWDDLQG ARQGLLGQIR QSAVAQRYQT PQ
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