Gene Pfl01_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2478 
Symbol 
ID3715296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2833237 
End bp2834025 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348209 
Protein GI77458703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC GCCCTACTGT TCTCATCACT GGCGCCTCTA CCGGCATTGG CGCCGTCTAT 
GCCGAACGCT TCGCCAAACG TGGTCACGAT CTGGTACTGG TCGCCCGCGA TCAGGCCCGC
CTGGACACAC TGGCAGCGCG CCTGCGCAGC GAGCACGACG TCGCCGTCGA TGTCATCCCG
GCAGACCTGA CCCAACTCGC CGATCTGACC ACCGTTGAAA GCCGCCTGCG CGACGACGCC
CGCATCGGCA TTCTCGTCAA TAACGCCGGC GCCGCGCTGT CCGGCCACTT CGTCGACCAA
AGCACCGACA GCGTCGCGCA ACTGGTGGCC CTCAACACCA CGGCGCTGGT GCGGCTCGCC
AGCGCCATCG CCCCACGCCT GGCCAAGGCC GGCGACGGCG CAATCATCAA CATCGGTTCG
GTGGTAGGCC TGGCGCCGGA GTTCGGCATG AGCGTCTACG GTGCGACCAA GGCCTTCGTG
CTGTTCCTGT CCCAGGGCCT GAGCCTGGAA CTCTCGCCGC AGGGCGTCTA CGTGCAAGCC
GTGCTACCCG CCGCCACCCG CACGGAAATC TGGGATCGCT CCGGCGTCGA CATCAACACC
CTGAGCGAAA TCATGGAAGT GGGTGATCTG GTGGATGCCG CACTGGTCGG TTTTGATCGT
CGCGAACCTG TGACCATCCC GCCGCTGCAC GAAGCCGAGC GCTGGGATGA CCTGCAGGGC
GCACGCCAGG GCCTGCTGGG ACAAATCCGC CAGTCTGCGG TTGCCCAGCG CTATCAGACG
CCACAGTGA
 
Protein sequence
MSTRPTVLIT GASTGIGAVY AERFAKRGHD LVLVARDQAR LDTLAARLRS EHDVAVDVIP 
ADLTQLADLT TVESRLRDDA RIGILVNNAG AALSGHFVDQ STDSVAQLVA LNTTALVRLA
SAIAPRLAKA GDGAIINIGS VVGLAPEFGM SVYGATKAFV LFLSQGLSLE LSPQGVYVQA
VLPAATRTEI WDRSGVDINT LSEIMEVGDL VDAALVGFDR REPVTIPPLH EAERWDDLQG
ARQGLLGQIR QSAVAQRYQT PQ