Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2475 |
Symbol | |
ID | 3715293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2829816 |
End bp | 2831024 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_348206 |
Protein GI | 77458700 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.46904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTTTC CTTCTACAGA TCCTTCCAAA AGAACAGGCG GCTGGAGCGC GGTGCTGGCG ATGTCGCTGG CCGCATTCGC TCTGGTCGCT TCCGAGTTCA TGCCCGTCAG CCTGCTGACG CCGATTGCGG CGGACCTGCA CATCACCGAA GGTCAGGCCG GGCAGGGTAT TTCCGTGTCC GGTGCCTTTG CATTGATCAC CAGTCTGTTG ATTGCCTCGG TCGCCGCTCG CGTCGAACGC AAGAAGCTTC TGCTTTGCCT GACCTTGTTG ATGATCGTCT CCGGAACGGT CGTCGCACTC GCCCCGGGCT ACCCGTCGTT CATGTTCGGA CGTGCGTTGA TCGGGATTGC GATTGGTGGT TTCTGGTCGC TATCGGCGGC GACTGCCATG CGCCTGGTGA AGCCTGAACA GGTTTCCCGT GCGCTGGCCA TCGTCAATGG CGGCAACGCT TTGGCCACGG TCATCGCCGC TCCGGCCGGC AGCTTCCTTG GCTCGTTGAT CGGCTGGCGC GGCGCATTCT TCTGTGTGGT TCCAGTCGCA GCGCTTGCCG CCGTGTGGCT GCTGATCAGC CTGCCGTCCT TCAAGGCCGA GCGCCAGGCC GGTAGCGGCA ACGTTCTGCG GTTGATGAGG CAATTGCCAG TGGCTTTGGG CATGGTCGCC GTCAGCGTCT TTTTCATGGG CCAGTTCATG CTGTTCACTT ACCTGCGGCC ATTTCTCGAA GGGGTCACCG GTGTCAGTGT TTCAACATTG TCTTTGATGC TACTGGGCCT GGGGCTGGCA GGTTTTATCG GCACCTTTCT GATCGAACGG TTTATGGGGC GTGGCCTCTA TCGCACGTTG ACCGCCATTC CGCTGATCAT GGCGGTGATC GCGCTGGCGT TGGTCAGCTT CGGCAAATCG CCGGTGCTGA CCGCCGTGTT GCTCGGACTT TGGGGACTGG TCGCCACAGC TGCGCCGGTT GGCTGGTGGA CGTGGCTGGC GCAGACGCTT CCGGATGACG CGGAAGCCGG AGGCGGCTTG CTGGTGGCCA TCGTCCAACT GGCGATCGCC GGCGGCGCAA TCGTTGGCGG CCTGGCGTTT GATCTGAGCG GTTACAAAGC CACCTTCGAG CTTAGCGCCG CTGTTCTGGT CGCCGCGTCT GTGCTGGCCT GGCTGGCCGG ACGCAATGCC ACGGAAGTTC ATCTTGTCGA GCCGAACGCG ACAGCCTGA
|
Protein sequence | MTFPSTDPSK RTGGWSAVLA MSLAAFALVA SEFMPVSLLT PIAADLHITE GQAGQGISVS GAFALITSLL IASVAARVER KKLLLCLTLL MIVSGTVVAL APGYPSFMFG RALIGIAIGG FWSLSAATAM RLVKPEQVSR ALAIVNGGNA LATVIAAPAG SFLGSLIGWR GAFFCVVPVA ALAAVWLLIS LPSFKAERQA GSGNVLRLMR QLPVALGMVA VSVFFMGQFM LFTYLRPFLE GVTGVSVSTL SLMLLGLGLA GFIGTFLIER FMGRGLYRTL TAIPLIMAVI ALALVSFGKS PVLTAVLLGL WGLVATAAPV GWWTWLAQTL PDDAEAGGGL LVAIVQLAIA GGAIVGGLAF DLSGYKATFE LSAAVLVAAS VLAWLAGRNA TEVHLVEPNA TA
|
| |