Gene Pfl01_2475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2475 
Symbol 
ID3715293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2829816 
End bp2831024 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content62% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_348206 
Protein GI77458700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.46904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTC CTTCTACAGA TCCTTCCAAA AGAACAGGCG GCTGGAGCGC GGTGCTGGCG 
ATGTCGCTGG CCGCATTCGC TCTGGTCGCT TCCGAGTTCA TGCCCGTCAG CCTGCTGACG
CCGATTGCGG CGGACCTGCA CATCACCGAA GGTCAGGCCG GGCAGGGTAT TTCCGTGTCC
GGTGCCTTTG CATTGATCAC CAGTCTGTTG ATTGCCTCGG TCGCCGCTCG CGTCGAACGC
AAGAAGCTTC TGCTTTGCCT GACCTTGTTG ATGATCGTCT CCGGAACGGT CGTCGCACTC
GCCCCGGGCT ACCCGTCGTT CATGTTCGGA CGTGCGTTGA TCGGGATTGC GATTGGTGGT
TTCTGGTCGC TATCGGCGGC GACTGCCATG CGCCTGGTGA AGCCTGAACA GGTTTCCCGT
GCGCTGGCCA TCGTCAATGG CGGCAACGCT TTGGCCACGG TCATCGCCGC TCCGGCCGGC
AGCTTCCTTG GCTCGTTGAT CGGCTGGCGC GGCGCATTCT TCTGTGTGGT TCCAGTCGCA
GCGCTTGCCG CCGTGTGGCT GCTGATCAGC CTGCCGTCCT TCAAGGCCGA GCGCCAGGCC
GGTAGCGGCA ACGTTCTGCG GTTGATGAGG CAATTGCCAG TGGCTTTGGG CATGGTCGCC
GTCAGCGTCT TTTTCATGGG CCAGTTCATG CTGTTCACTT ACCTGCGGCC ATTTCTCGAA
GGGGTCACCG GTGTCAGTGT TTCAACATTG TCTTTGATGC TACTGGGCCT GGGGCTGGCA
GGTTTTATCG GCACCTTTCT GATCGAACGG TTTATGGGGC GTGGCCTCTA TCGCACGTTG
ACCGCCATTC CGCTGATCAT GGCGGTGATC GCGCTGGCGT TGGTCAGCTT CGGCAAATCG
CCGGTGCTGA CCGCCGTGTT GCTCGGACTT TGGGGACTGG TCGCCACAGC TGCGCCGGTT
GGCTGGTGGA CGTGGCTGGC GCAGACGCTT CCGGATGACG CGGAAGCCGG AGGCGGCTTG
CTGGTGGCCA TCGTCCAACT GGCGATCGCC GGCGGCGCAA TCGTTGGCGG CCTGGCGTTT
GATCTGAGCG GTTACAAAGC CACCTTCGAG CTTAGCGCCG CTGTTCTGGT CGCCGCGTCT
GTGCTGGCCT GGCTGGCCGG ACGCAATGCC ACGGAAGTTC ATCTTGTCGA GCCGAACGCG
ACAGCCTGA
 
Protein sequence
MTFPSTDPSK RTGGWSAVLA MSLAAFALVA SEFMPVSLLT PIAADLHITE GQAGQGISVS 
GAFALITSLL IASVAARVER KKLLLCLTLL MIVSGTVVAL APGYPSFMFG RALIGIAIGG
FWSLSAATAM RLVKPEQVSR ALAIVNGGNA LATVIAAPAG SFLGSLIGWR GAFFCVVPVA
ALAAVWLLIS LPSFKAERQA GSGNVLRLMR QLPVALGMVA VSVFFMGQFM LFTYLRPFLE
GVTGVSVSTL SLMLLGLGLA GFIGTFLIER FMGRGLYRTL TAIPLIMAVI ALALVSFGKS
PVLTAVLLGL WGLVATAAPV GWWTWLAQTL PDDAEAGGGL LVAIVQLAIA GGAIVGGLAF
DLSGYKATFE LSAAVLVAAS VLAWLAGRNA TEVHLVEPNA TA