Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2443 |
Symbol | |
ID | 3715300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2795287 |
End bp | 2796189 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | YP_348174 |
Protein GI | 77458668 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.586469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.671238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCCC GATTGCCATC GCTTAACGGA TTGCGCGCCT TCGAATGCGC CGCCCGGCAT ATGAGCTTCA CCCGCGCCGC CGAAGAACTG AACGTCACGC AGACCGCGAT CAGCCATCAG ATCCGTCGCC TCGAGGATGA GCTTGGCGTG CGTCTGTTCA TGCGCTTGAA GGACGGTTTG GCGTTGACCG AGGAGGGCAA TGCTTACTTG CCCGGCATTC GTTCGGCGTT TCTTGAATTG CGCTACTCGA CTGAAAAGCT GCTGGAATCC AGCCACAACA GCGTCCTGAC CATCAGCACG CTGGTGTCGG TGGCATCGAA ATGGTTGTTG CCGCGATTGC CATCGTTTCG CGAGGCGCAT CCGGACATTG ATGTGCGGAT CAGTGCTTCC ACCGAGTGGG TGGACTTTCG CAAGGGCGGC ATCGATGCGG CGATCCGCTA CGGCGACGGG AATTGGCCTG GACTTCGGGC CGACTGGTTG ATGGCCGACG AGATCTTTCC GGTATGCAGC CCGCGCTTGC TGACCGGCGA CAAGCCGTTG AATACGCCGG CGGACCTGGC CCATCACCCT TTGCTGCAAG TCAGCGGCGT GACCGCCAAT GACTGGAACG ACTGGCTGCA TGCGGCAGGC CAGCCACCGC TGACGGCCAA AGGCCCACGA TTGACCTTCG ACCTGGCGAT GATGGCGGTG CAGGCGGCGA TTGACGGGCA GGGCGTGTGC ATCGGTCGCT CGACCTATGT CGATGACGAT CTGCGCGCAG GCAGGCTGGT GGCGCCGTTT GATTTGCGCT TGAAATCCGC TTCCGGCTTC TATCTCGTCA CGCCCCACGA TCAGGCCGAA TCGAAAAAGA TCGTGGCGTT CAGAGGCTGG CTATCGCAGG TGCTGGCCAA ACCCTTTGTA TAA
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Protein sequence | MLPRLPSLNG LRAFECAARH MSFTRAAEEL NVTQTAISHQ IRRLEDELGV RLFMRLKDGL ALTEEGNAYL PGIRSAFLEL RYSTEKLLES SHNSVLTIST LVSVASKWLL PRLPSFREAH PDIDVRISAS TEWVDFRKGG IDAAIRYGDG NWPGLRADWL MADEIFPVCS PRLLTGDKPL NTPADLAHHP LLQVSGVTAN DWNDWLHAAG QPPLTAKGPR LTFDLAMMAV QAAIDGQGVC IGRSTYVDDD LRAGRLVAPF DLRLKSASGF YLVTPHDQAE SKKIVAFRGW LSQVLAKPFV
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