Gene Pfl01_2440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2440 
Symbol 
ID3715336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2793147 
End bp2793818 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content64% 
IMG OID 
Productparaquat-inducible protein A 
Protein accessionYP_348171 
Protein GI77458665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.226744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGC CACCGACTGC CAGCGAACTC AACCTGTGCC TGTGCCACAG CTGCGGACTG 
GCCTGCGACA TGACCGGCGA ACCGCACCAA TGCCCGCGCT GCGACGCGCC GCTGCACCGG
CGCAAGACCA ACTCGCTGAC CCGCACCTGG GCCTACATGT TCGCCGCGCT GGCGTTTTAC
GTGCCGGCCA ATCTGCTGCC GGTGATGAAC ACCACCCTGC TCGGCAGCGG CGCCGACAGC
ACCATCATGA GCGGCGTGCT GGAGTTCTGG GAACACGGTG CGTGGGACAT CGCCGTCATC
ATCTTCGTCG CCAGCATCGC CGTGCCGGGG GTGAAATTCG TGGCGCTGAC CTTGCTGCTG
GTCACCGTGC AACGGGACAG CCATTGGGCG CGCAAGGAGC GTTCGAAGCT GTACCGCTTC
GTCGAGCTGA TCGGCTATTG GTCGATGCTC GATGTGCTGG TGGTCGCGCT GGTGGCGGCG
CTGGTGAAAT TCCAGGCGCT GGGGGATATC GAGCCGCGCG TAGGGATTCT GTTTTTCGGC
CTGGTGGTCG TGTTCACCAT GCTCTCGGCC ATGAGTTTCG ACCCGCGCCT GATCTGGGAT
AACGCGCCGG ACGAAGAAAC GGAAGAACCC CGGCACTCGA CTGAACAAGT GCCGGGGCAT
CAAGCGGTTT AA
 
Protein sequence
MKRPPTASEL NLCLCHSCGL ACDMTGEPHQ CPRCDAPLHR RKTNSLTRTW AYMFAALAFY 
VPANLLPVMN TTLLGSGADS TIMSGVLEFW EHGAWDIAVI IFVASIAVPG VKFVALTLLL
VTVQRDSHWA RKERSKLYRF VELIGYWSML DVLVVALVAA LVKFQALGDI EPRVGILFFG
LVVVFTMLSA MSFDPRLIWD NAPDEETEEP RHSTEQVPGH QAV