Gene Pfl01_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2388 
Symbol 
ID3715440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2748193 
End bp2749029 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content65% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_348120 
Protein GI77458615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.262251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000340178 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGACAAAC GCAACTGGAT CGAGCTGTCC CAGGATGCCG ACACCGGGAT CGAGTCGATT 
CGTGCCCACT TTCAGGGACA TGCCTACGAT CCGCACTGGC ATGACAGCTT TCTGGTGGGC
GTCACCGAGC AGGGCGTGCA GCAGTTTCAT TGCCGGCGCG TGCGCCATCT GAGTACGCCG
GGCAAGATTT TCATGCTGGA GCCGGGGGAG ATCCACGACG GGCACGCGCC GACGGAGGAG
GGTTTCACCT ATTCCATGCT CTACCTCGAC CCGCACTGGC TGGAGCGTGA ATTGCGCGTG
CTGTTCGAAC ACGCGCCGGA CAACAGCCAG CTCGGGTTCA CCGATACCCT GAGCCAGGAT
TCGCGCCTGT CCACGGCCAT CAATCAGGCC TTCAACGCCC TGCATCAAGG CGACTTGCGC
ATCGTGCGCC AGACCGCCGT CGACACCTTG CTCGGTGCGC TGACGTCCCA CCTTGACTGG
CGCAAGCGCC AGCCGTTCGA TCCGCGCCTG CCACGCGTGG CCCAGGTGGC GCGGGACTAT
CTGCATGCTC ATGCCTTTGA GGACATCGGG CTGGACGACG TAGCCCAGGC CTGCGGGGTC
GATCGCTTTC GACTGACCCG TGCGTTCAAG GCCGCTTTCG GACTGGCGCC GCATGCCTAC
CTGATCCAGC TGCGGCTGGC CCGCGCCCGC CAATTGCTGG CGCGCGGCGA AACACCCGCC
ACCGTCGCCA GCGCCCTCGG TTTCGCCGAT CAGAGCCATC TCGGGCGCTG GTTCCGCCGT
GCCTATCACC TGACGCCGGC GGACTACCGC AAGCGCTGCT CAAACCTTCC AGACTGA
 
Protein sequence
MDKRNWIELS QDADTGIESI RAHFQGHAYD PHWHDSFLVG VTEQGVQQFH CRRVRHLSTP 
GKIFMLEPGE IHDGHAPTEE GFTYSMLYLD PHWLERELRV LFEHAPDNSQ LGFTDTLSQD
SRLSTAINQA FNALHQGDLR IVRQTAVDTL LGALTSHLDW RKRQPFDPRL PRVAQVARDY
LHAHAFEDIG LDDVAQACGV DRFRLTRAFK AAFGLAPHAY LIQLRLARAR QLLARGETPA
TVASALGFAD QSHLGRWFRR AYHLTPADYR KRCSNLPD