Gene Pfl01_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2385 
Symbol 
ID3715437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2745510 
End bp2746535 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_348117 
Protein GI77458612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.259464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000372406 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGACCCCA CCTTGATCGA ACGACGCCAA TTCAGCGGTG GCATGAAAGG CAAGAACCTT 
CGCTACCTGA ACGAGCCCGC CAGCGGGCCG GGACGCATGA CCCGCACCGG GTTCGTGCTG
CTGGAGCATT TTTCCCTGCC GGCCTTCACT CAGGCGCTGG ACACTCTTGT CACCGCCAAT
CTGCTGCGCC CCGGTCTATT TTCCACGCGC ACCTTTGGCC TGAGCGACGG CGAAGTGATC
AGCGATCTGG GGCTGGTGAT CCGCCCGGAC TCGCGTCTGG AAACCAGCGT GTTGCAGGAA
CTGGATCTGC TGGTGATCTG CGGCGGTTAC CGCACGGAAT TGAAGGCGAG CGACGAGTTC
ATCAACCTGC TGAAAATGGC CGCCGAGGCC GGCGTGATAC TGGCCGGGCT GTGGAACGGC
GCGTGGTTCC TGGGTCGGGC AGGGGTGCTG GAAGGCTACC GCTGTGCGAT TCACCCGGAG
CATCGGCCGG CGCTGGCGGA AATTTCCAAG GCGACCCAGG TCAGCAGCGA GCCCTACGTG
ATCGACCGCG ACCGTTTGAC GGCGTCGAGT CCGTCCGGCG CGTTCCACAT GGCGCTGGAC
TGGATCAAGG GCCTGCACGA CAAGGCGCTG GTCGAAGGCA TCGAAGACAT TCTGGCGTTC
GAGGAATCGC GTTACCGGCG GATCAAGCCG ACCGAGAACC TCTGCGTCAG CGCGCCGTTG
CGTGAGGTGG TGAAGCTGAT GGACGCCAAT CTCGAAGAAC CGCTGGAGCT GGAGCAACTG
GCGGTGTATG CCGGGCGTTC CCGGCGTCAG CTGGAACGGC TGTTCAAAGA ACAACTGGGC
ACCACGCCGC AGCGTTATTA CATGGAGCTG CGCATCACCG AGGCCCGGCG TCTGCTGCAA
CACACCGAAC TGTCTCAGGT GGACGTGCTG GTGGCGTGCG GATTCGTGTC GCCGAGCCAT
TTCAGCAAGT GCTACAGCGC CTATTTCGGT TATCGCCCAT CCAAAGAAAA ACGGCTCGTC
AAATGA
 
Protein sequence
MDPTLIERRQ FSGGMKGKNL RYLNEPASGP GRMTRTGFVL LEHFSLPAFT QALDTLVTAN 
LLRPGLFSTR TFGLSDGEVI SDLGLVIRPD SRLETSVLQE LDLLVICGGY RTELKASDEF
INLLKMAAEA GVILAGLWNG AWFLGRAGVL EGYRCAIHPE HRPALAEISK ATQVSSEPYV
IDRDRLTASS PSGAFHMALD WIKGLHDKAL VEGIEDILAF EESRYRRIKP TENLCVSAPL
REVVKLMDAN LEEPLELEQL AVYAGRSRRQ LERLFKEQLG TTPQRYYMEL RITEARRLLQ
HTELSQVDVL VACGFVSPSH FSKCYSAYFG YRPSKEKRLV K