| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2342 |
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| Symbol | |
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| ID | 3715527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2701584 |
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| End bp | 2703971 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_348074 |
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| Protein GI | 77458569 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.198134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCACC GTTCGCGTTC ATTACTCGCC ATCGCTGTTG TCAGTGCAAT CTGGCAACTT
CCTGCGCAAG CCGAAGAGAC TTCCGCGCGC GTCGACGATG ACACACGGCT GGGCACCGTG
CTGGTCACCG GCACCCGGGG CACCGCACGC ACGGTGCTGG ATTCGCCGGT GCCGGTGGAT
GTGCTGACCG CCGAGGACCT GAAGACCGCC GGCGCCAGTG GCGGCGAGCT GGGCCAGGCG
TTGCAGACGC TGTTGCCGTC GTTCAGTTTT CCGCGCCAGT CCAACTCCGG CGGCGCCGAC
CACGTGCGCG CCGCGCAGCT TCGCGGCATG AGCCCGGATC AGGTGCTGGT GCTGGTCAAC
GGCAAGCGCC GCCACACCTC GGCCGTGGTC AACGACTCGT CGAAAATCGG TCGCGGCACG
GCGCCGGTGG ACTTCAACTC GATCCCGATC AGCGCGATCA AACGCATCGA AGTGCTGCGC
GACGGCGCGG GTGCACAGTA CGGCTCCGAC GCGATTGCCG GGGTGATCAA CATCATCCTC
GACGACGCCC CCGAAGGCGG CGAAGTCTCC ACCAGCTACG GCGCCTACCA CACCCACCAG
GACGCCATCG GCAAAACCAC CACCGACGGC CAGAACAGCG TGACCACCGC CAAGATCGGC
ACGCGGCTGG GTGAGGAGGG CGGGTTCATT CGCGGCGGTA CCGAGTACAA GGATCGCAAC
CCGACCAACC GTGCCGGCTA CGACGGTTTT GCCGACACCC CGGGCCAGCG CAACTACGTG
ATGGGCGACG GCGTGGCGCG GGACGTCAAC GCCTGGTTCA ACGGCGAATT GCCGCTGGCC
GGCGGCAAGG CCTACAGCTT CGGCACCTAC AACGAACGCC ACACCACCGG CGCCGAGTTC
TATCGCTATC CGTCCGAGCA GCCGCAGTTC TACCCCAACG GCTACCTGCC GCAATCGCTG
GGCGACAACA CCGACATCTC CGCCACCGCC GGTTACAAAG GCCTGATCGG CGACGACTGG
GATTTCGACA GCAGCGTCAC CCACGGTCGC AACCGCTTCG AATCGGCAAC CCGTCGCACC
CTCAACGTCA GCCTCGGCGC GGACTCGCCG ACCCGCTTCG ACACCGGCGA CTACGAGTTG
CGCCAGACCA CCACCAACCT CGATTTCAGC CGCGAATTGC GCCTCGGTAG CCGCTCGTTC
GTGCTGGCGG TGGGCGGTGA ATATCGCTAC GAAAACTACC TGACCTTTGC CGGGGACGAG
GCTTCCTATA TTGGTTCCGG GGCCGATGGC GCCAACGGCC TGCGCCCGAG TGAGGAGTCG
GATCTGGATC GCAACGTGTT CGGCACCTAC GCCGAATTGT CCGGTGATCT CACCGACCGT
TTCTTCGTCG ATGCCGCCAC GCGCTGGGAA CATTACGACG ATGCGGGCAG CAAACTCACC
GGCAAGCTCA GCGGTCGCTA CAAGCTGACC GATCAATGGG CGTTGCGCGG TGCGGTGTCG
AACAACTTCC GCGCGCCGTC GCTGGCCCAG AGCGGCTTCC AGAACACCAC CAGCAACTTC
GGCGACGGCG GCACGCTCAC CGACATCCGC GTGTTGTCGG TCAACGATCC GATTGCCCGT
GCCCTGGGCG CTGAAAAGCT CGATCCGGAA ACCTCGAAGA ACTTCAGCCT CGGCCTGACG
TTCCAGTTGA ACGAACGCTT CGATGCGTCG CTCGACATGT TCCGTATCGA CGTCAAAGAC
CGTATCACCC TGTCGCAGCG AATCGGCAGC GACGCGCTGG AAAGCTACAT CAATGACAAC
CTCGGCGTGC CGGGCGTGCA CGACGTCAAC TTCTTCACCA ACGCTGCCGA CACCAGCACC
GACGGTGCCG AACTGGTGCT CAACTACCAT CAGCCGTTCT ACGACGGGCA ACTGGGCCTG
ACCACCGCGT ACACCTACAA CCACACCAAG GTCACCAGCA CCAAGGGCAC GCCGTCGCAA
CTGACCGCCT TAGGGATCGG CAATGACGCG CTGGTCGGCG TCGAGGAACG CAACACCCTG
ACCGACGCCG CGCCCAAGGA TCGCTTCGTG TTTTCCGCCA ACTGGACCAG CGAACACTGG
GGCCTGCTCG GGCGTCTGAC CCGCCAGGGC GAAACTACTC GGGTGTTCGA TTTCGGCGAC
TCGCAGCCTG AGCAAACCTA CGGCGCGGTG TGGCAACTGG ACGCCGAGGT GACCTACAAA
TTCACCCCGA AATTCAGCAT CGCCCTGGGT GGCAACAACC TGACCGACAA CTACCCGGAA
CGCTCCGGCT CGGCCATCAA CTACGGCGGC AACCTGCCGT ACGACGTGCT GTCGCCGATC
GGCACCAACG GCGCGTATTA CTACGCCACC GCGACTTACG GCTTCTGA
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| Protein sequence | MIHRSRSLLA IAVVSAIWQL PAQAEETSAR VDDDTRLGTV LVTGTRGTAR TVLDSPVPVD
VLTAEDLKTA GASGGELGQA LQTLLPSFSF PRQSNSGGAD HVRAAQLRGM SPDQVLVLVN
GKRRHTSAVV NDSSKIGRGT APVDFNSIPI SAIKRIEVLR DGAGAQYGSD AIAGVINIIL
DDAPEGGEVS TSYGAYHTHQ DAIGKTTTDG QNSVTTAKIG TRLGEEGGFI RGGTEYKDRN
PTNRAGYDGF ADTPGQRNYV MGDGVARDVN AWFNGELPLA GGKAYSFGTY NERHTTGAEF
YRYPSEQPQF YPNGYLPQSL GDNTDISATA GYKGLIGDDW DFDSSVTHGR NRFESATRRT
LNVSLGADSP TRFDTGDYEL RQTTTNLDFS RELRLGSRSF VLAVGGEYRY ENYLTFAGDE
ASYIGSGADG ANGLRPSEES DLDRNVFGTY AELSGDLTDR FFVDAATRWE HYDDAGSKLT
GKLSGRYKLT DQWALRGAVS NNFRAPSLAQ SGFQNTTSNF GDGGTLTDIR VLSVNDPIAR
ALGAEKLDPE TSKNFSLGLT FQLNERFDAS LDMFRIDVKD RITLSQRIGS DALESYINDN
LGVPGVHDVN FFTNAADTST DGAELVLNYH QPFYDGQLGL TTAYTYNHTK VTSTKGTPSQ
LTALGIGNDA LVGVEERNTL TDAAPKDRFV FSANWTSEHW GLLGRLTRQG ETTRVFDFGD
SQPEQTYGAV WQLDAEVTYK FTPKFSIALG GNNLTDNYPE RSGSAINYGG NLPYDVLSPI
GTNGAYYYAT ATYGF
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