Gene Pfl01_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2236 
Symbol 
ID3715655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2565578 
End bp2566927 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content62% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_347968 
Protein GI77458463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATT CACACACCTC CCCCACCACC GCCCCGCCGT TGATTGCCGG CGACAGGGAC 
GCCGTCTCCT CCCGGCGGCT GCCGACACGA CGGCGCTGGT TCATGCTCTC GCTGCTGCTG
ATTGCGACGA TCATCAACTA CATCGACCGG GTGAACATCT CGATTGCCGC TCCGTTCATG
GCCAAGGACC TGGGCCTGGA CAAGATTGAA ATGGGGCTGA TCTTCTCCGC CTTTGCCTGG
ACCTACGCAC TGGCGCTGGT GCCGGCCGGG TTTATCGCCG ACCGCTTCGG CTCACGTTTT
ACCTACGGGG TTTCACTGAT CAGTTGGTCG ACCGTCACGG TGTTTCAAGG CTTCGCCACG
GGATTCGCTT CGCTGTTCGG CCTGCGTCTG GCCGTCGGGG CGATGGAAGC GCCGGCGTTT
CCGGCCAACA GCCGTGCGGT GACCGTTTGG TTTCCGGCGC GGGAACGGGG CATGGCCAGC
AGCATCTACG TCTGCGGGCA ATACCTGGGC ACGGCGCTGT TTACCGGTGC ACTGCTGTGG
CTGGCCACAA CCTTTGACTG GCGCCACGTT TTCTACAGTA CCGGCGCGCT CGGGATCGTC
TTCGGCGTGC TGTGGTTGTA TCTGTATCGC GATCCGTTGA ACTGCAAGAA AGTCAGCAAG
GAGGAGCTGA AATACATCGA GGCCGGTGGC GGACTGGTCA AGAGCAGTCA GGAACGCACT
CGTTTCAACT GGCGGCAGAT CGCCGAGCTG TTCAGTTACC GTCAGGTCTG GGCCATTTGC
ATCGGCAAGT TCGCCAGCAC CTCGGCGCTG TACTTCTTCC TCACCTGGTT CCCGACCTAT
CTGATTGAAG AACGCCATCT GACCACGATC AAGGCCGGGA TCTTTGCCGT GATGCCCTTC
GTGGGCGCAA CGGTCGGCAT CCTGCTCGCC GGCATCGTCT CCGACCTGTT GATCCGTCGT
GGTTATTCAA TGTCTTTCGC CCGGAAACTG CCGCTGGTGG TCGGGTCGAT GCTGGGCATG
TCGATCGTGC TGGTGAACTT CACCGACTCG AACGTCATCT GCATCGCCGT GCTGACCATT
GCCTTTTTCG CTCAGGGCAT CGCGTCGTCC TCGTGGGCGG CGGTGTCGGA GGTGGCGCCC
AAGGAACTGA TCGGGCTGAC CGGCGGGATC ACCAGCCTGG CCGCGAACAT CGGCGGCATC
GTCACTCCGA TCGTGATCGG CGCCATCGTC CACGCCACCG GCTCGTTCGC CTGGGCGTTC
TGGTTCATCG GTGCCGTGGC GCTGATCGGC ACCCTCTCGT ATTCGTTGCT GCTCGGCCGC
CTGTACCGCA TCGAGTTGAA AACGCGCTGA
 
Protein sequence
MSNSHTSPTT APPLIAGDRD AVSSRRLPTR RRWFMLSLLL IATIINYIDR VNISIAAPFM 
AKDLGLDKIE MGLIFSAFAW TYALALVPAG FIADRFGSRF TYGVSLISWS TVTVFQGFAT
GFASLFGLRL AVGAMEAPAF PANSRAVTVW FPARERGMAS SIYVCGQYLG TALFTGALLW
LATTFDWRHV FYSTGALGIV FGVLWLYLYR DPLNCKKVSK EELKYIEAGG GLVKSSQERT
RFNWRQIAEL FSYRQVWAIC IGKFASTSAL YFFLTWFPTY LIEERHLTTI KAGIFAVMPF
VGATVGILLA GIVSDLLIRR GYSMSFARKL PLVVGSMLGM SIVLVNFTDS NVICIAVLTI
AFFAQGIASS SWAAVSEVAP KELIGLTGGI TSLAANIGGI VTPIVIGAIV HATGSFAWAF
WFIGAVALIG TLSYSLLLGR LYRIELKTR