Gene Pfl01_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2187 
Symbol 
ID3715728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2470638 
End bp2471396 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content62% 
IMG OID 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_347919 
Protein GI77458414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.800091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA GATCCGTTGT ACTCGATACC GAAACCACCG GCATGCCGGT GACCGACGGC 
CACCGGATTA TCGAAATCGG TTGTGTCGAG TTGATCGGTC GACGTCTGAC GGGCCGGCAC
TTTCACGTTT ATCTGCAACC GGATCGCGAG AGTGACGAAG GCGCGATTGC CGTTCATGGC
ATCACCAACG AATTCCTGGT CGGCAAGCCG CGCTTCGCCG AAGTGGCCGA CGAGTTCTTC
GAGTTCATCA ACGGCGCGCA ACTGATCATC CATAACGCGG CGTTCGACGT TGGCTTCATC
AACAACGAAT TCGCCCTGAT GGGCCAGCAT GATCGCGCGG ACATCACGCA GCACTGCACG
ATCCTCGACA CCCTGATGAT GGCCCGGGAA CGTCACCCGG GTCAGCGCAA CAGCCTCGAT
GCCCTGTGTA AACGCTACGG CGTCGACAAC TCCGGTCGTG AGCTGCACGG CGCCTTGCTC
GACTCGGAGA TTCTCGCCGA CGTCTACCTG ACCATGACCG GTGGCCAGAC CAGCCTTTCG
CTGGCCGGCA ACGCTTCCGA CGGCAATGGC ACGGGCGAGG GCGCGGACAA CTCCGCCACC
GAAATCCGCC GTCTGCCGGC AGATCGTCAG CCGGGGCGAA TCATTCGCGC CACTGAAGCC
GAGCTGGCCG AGCACCAGGT GCGCCTGGAA ATCATCGCCA AGTCAGCTGG CGCCCCCGCG
CTGTGGACTC AGTTGCTGGA AGCCGAAGCT CAGGCGTAA
 
Protein sequence
MATRSVVLDT ETTGMPVTDG HRIIEIGCVE LIGRRLTGRH FHVYLQPDRE SDEGAIAVHG 
ITNEFLVGKP RFAEVADEFF EFINGAQLII HNAAFDVGFI NNEFALMGQH DRADITQHCT
ILDTLMMARE RHPGQRNSLD ALCKRYGVDN SGRELHGALL DSEILADVYL TMTGGQTSLS
LAGNASDGNG TGEGADNSAT EIRRLPADRQ PGRIIRATEA ELAEHQVRLE IIAKSAGAPA
LWTQLLEAEA QA