Gene Pfl01_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2121 
Symbol 
ID3715857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2406676 
End bp2407437 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID 
Productpeptidase C26 
Protein accessionYP_347853 
Protein GI77458348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0384981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.197243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA AGCCATTGAT CGGCGTTACT GCGTGCGTCA AACAGATTGG CCTGCACCCC 
TATCACATCA GCGGCGACAA ATACGTTCGC GCTGTCAGCG TTGCGGCGCT GGGGTTGCCC
GTCGTCATTC CTTCCCTTGG CCAACTGACT GAAATCGAAG ATCTGCTGGG TCAGCTCGAC
GGTCTGTTGC TGACCGGCTC GCCGTCCAAC GTGGAACCCT TCCACTATCA GGGCCCGGAC
AGCGCTCCCG GCACGGACCA CGATCCGGCG CGGGATGCCA CTACCCTTCC TTTATTGCGT
GCAGCCATCG CGGCGGGCGT TCCGGTACTC GGCATCTGCC GGGGTTTCCA GGAAATGAAC
GTGGCGTTCG GCGGCAGCCT GCACCAGAAG GTGCATGAGC TGCCGGGCAT GCTCGATCAC
CGCGAAGCCG ACAGCCCGGA TGTCGCCGTG CAATACGCCC CGGCCCATGC CGTGACGGTG
CTGCCCGGTG GCGTGTTCGA AGCGCTGGAG CTGCCGAGTG AATTCCAGGT CAACTCGATT
CACAGTCAGG GCATCGACCG CCTCGCTCCC GGTCTGCGCG CCGAAGCCGT GGCGCCGGAT
GGCCTGATCG AGGCGGTCTC GGTGGAGCAC AGCCCGACCT TCGCCCTCGG CGTGCAATGG
CACCCGGAAT GGCAAGTGCT GGACAACCCG AACTACCTGC GGATTTTCCA GGCATTCGGC
GAGGCTTGCC GCCAGCGTGC GGCGCGACGC AACCAGCGCT GA
 
Protein sequence
MAFKPLIGVT ACVKQIGLHP YHISGDKYVR AVSVAALGLP VVIPSLGQLT EIEDLLGQLD 
GLLLTGSPSN VEPFHYQGPD SAPGTDHDPA RDATTLPLLR AAIAAGVPVL GICRGFQEMN
VAFGGSLHQK VHELPGMLDH READSPDVAV QYAPAHAVTV LPGGVFEALE LPSEFQVNSI
HSQGIDRLAP GLRAEAVAPD GLIEAVSVEH SPTFALGVQW HPEWQVLDNP NYLRIFQAFG
EACRQRAARR NQR