Gene Pfl01_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2117 
Symbol 
ID3715912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2402355 
End bp2403452 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content59% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_347849 
Protein GI77458344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.428561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.337405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGT TTGGCAGGAC TCTGCTGACA CTGTCCTTAT TGGGCGCAAT CGCCACAGGC 
GCCCAGGCCA ACGACAAGGT GCTGCGCGTT TACAACTGGT CGGATTACAT CGCCCCGGAC
ACCGTCAAGA AGTTCGAGGA CGAGACCGGC ATCCGCGTGA CCTACGACGT GTTCGACAGC
AATGAAACCC TCGAGGCGCG TCTGCTCGCG GGTAAATCCG GCTACGACAT CGTGGTGCCG
TCCAACAGTT TCCTGGCCAA GCAGATCAAG GCCGGGGTCT ATCAGACCCT GGACAAATCG
AAACTGCCAA ACTGGAAAAA CCTCAACCCG GTGCTGCTGA AAAACGCCTC CGCCAGTGAT
CCGGACAACG CCCACGCGTT CCCGTACATG TGGGGTTCGA TCGGCATCGG CTTCAACCCG
GACAAGGTCA AGGAAGTGCT CGGCAAGAAT GCGCCGACCA ATTCCTGGGA CCTGCTGTTC
AAACCGGAGA ACGCCGAGAA GCTCAAGGCC TGCGGTATCA GCTTCCTCGA CTCGCCCACC
GAAATGATCC CGGCCGCCCT GCACTACCTG GGCTATCCGG TGAGCGACAA GGACGCCGCG
CACATCAAGG AAGCCGAGGC GCTGTTCATG AAGATTCGCC CGAACGTGGC GTATTTCCAC
TCTTCGAAAT ACATTTCGGA CCTGGCCAAC GGCAACATCT GCGTGGCAGT CGGTTACTCC
GGTGATGTAT TGCAGGCCAA GGCCCGCGCG GTGGAATCGG GCAACAACGT CGTGATCGAC
TACAGCATTC CCAAGGAAGG TGCCGGCAGC TTCTACGACA TGGTCGCCAT CCCGCGCGAT
GCAGCGAACG TCGAGAACGC CTACCTGTTC ATGGACTTCC TGATGCGCCC GGACATCATC
GCCGAGATCA CCAACAGCAA CGGCTACAGC AACGCCAACG CAGCGGCGAC GCCGCTGGTG
GACGAAGCGA TCCGCAACGA TCCGGGCTCG TACCCGTCGC AGGAAGTGAT GGCGACACTG
TATGCGGTGC CGGATCAACC GATTGCCACC CAGCGGATCA TGACCCGGGG CTGGACCCGC
GTGAAACTCG GCAAATAA
 
Protein sequence
MKMFGRTLLT LSLLGAIATG AQANDKVLRV YNWSDYIAPD TVKKFEDETG IRVTYDVFDS 
NETLEARLLA GKSGYDIVVP SNSFLAKQIK AGVYQTLDKS KLPNWKNLNP VLLKNASASD
PDNAHAFPYM WGSIGIGFNP DKVKEVLGKN APTNSWDLLF KPENAEKLKA CGISFLDSPT
EMIPAALHYL GYPVSDKDAA HIKEAEALFM KIRPNVAYFH SSKYISDLAN GNICVAVGYS
GDVLQAKARA VESGNNVVID YSIPKEGAGS FYDMVAIPRD AANVENAYLF MDFLMRPDII
AEITNSNGYS NANAAATPLV DEAIRNDPGS YPSQEVMATL YAVPDQPIAT QRIMTRGWTR
VKLGK