Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2109 |
Symbol | |
ID | 3715904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2397052 |
End bp | 2397693 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | putative xanthine dehydrogenase iron-sulfur-binding subunit |
Protein accession | YP_347841 |
Protein GI | 77458336 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.335767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC ATCCGCCGTT GGCGATTTCC CGACGCCGTT TCCTGATTCT CGGGGCCGTG ACCGCGACTG CGTTCGCGAT GCCCCCTTTC ATCAACCTCA AGGCCTACGC GGCCAGCCTG GAGCAACCGG CCATGGCCAA AGTAACCATC GAAGTCAACG GCAAGCCGCA GACGCTGGAG ATCGACACCC GCACCACCCT GCTCGACGCC CTGCGCGAAC ACCTGCAGCT GACTGGCAGC AAAAAGGGCT GCGACCACGG CCAGTGCGGC GCCTGCACGG TGATCGTCGA TGGCCGGCGA ATCAATTCCT GCCTGACCCT GGCGGTGATG CAGGACGGCG CCAAAGTCAC CACCATCGAA GGCCTCGGCA TGCCGGACCA CCTGCATCCG ATGCAGGCGG CGTTCATCAA GCATGACGGT TACCAGTGCG GCTACTGCAC GCCGGGACAG ATCTGTTCGG CGGTCGCCGT GCTCCAGGAA ATCCGCGACG GCATCCCCAG CCACGCCAGC GCCAGCCTCA CCGAAGCACC GCAACTGATC GCCAGCGAAT TGCAGGAACG CATGAGCGGC AACATCTGCC GGTGCGGCGC CTACTCGAAC ATCATCGAAG CCATCAGCGA AGTCGCGGAG GTGCCAGCAT GA
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Protein sequence | MNDHPPLAIS RRRFLILGAV TATAFAMPPF INLKAYAASL EQPAMAKVTI EVNGKPQTLE IDTRTTLLDA LREHLQLTGS KKGCDHGQCG ACTVIVDGRR INSCLTLAVM QDGAKVTTIE GLGMPDHLHP MQAAFIKHDG YQCGYCTPGQ ICSAVAVLQE IRDGIPSHAS ASLTEAPQLI ASELQERMSG NICRCGAYSN IIEAISEVAE VPA
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