Gene Pfl01_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2079 
Symbol 
ID3716050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2364224 
End bp2365270 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347811 
Protein GI77458306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGG CCAGACTCAA CGAATTCATG GGCAAACTGG TCAACGACAT GGGCGGCGCG 
GCGATGCTGG CCAATGTCAT TGTCGGCGAA GAACTCGGCC TTTACCGGGC GATGGCCGAC
AGTCAGCCGA TCAGCCCCGA AACCCTTGCC GAAAAAACCA CCTGCAACCC GCGACTGGTG
CGCGAATGGC TGAGCGCCCA CGCGGCGTCC GGCTACATGG AACACCACGA CGGCAAGTTT
CGTTTGCCGG AAGAACAGGC GCTGGCCCTG GCCAAGGAAG ATTCGCCGGT GTACGTGGCC
GGCGGCCTCG GCGTGGTGGC ATCGTTTTTC CATGACAAGG ACAAACTGGT CAAAGCCATG
CGCGGCAACG GCGCCCTGCC GTGGGGTGAT CACCATCCGT GCATGTTCAC CGGCACCGAG
CGCTTTTTCC GCCCCGGCTA CAAGGGGCAT TTGATCGCCG AATGGCTGCC GGCGCTGGAC
GGTGTGGTGG CCAAACTCGA AGCAGGCGCC AAGGTCGCCG ATATCGGCTG CGGTCATGGT
GCGTCCACGG TGATCATGGC CCAGGCCTAT CCCAACTCGC GGTTCGTCGG CTTCGACTAT
CACGCGCCTT CGATCACCGT CGCCACCCAA CGGGCCGAAG AAGGCGGCGT CAGCAGTCGC
GCGCGGTTCT TCCAGGGCAC GGCGAAAAGC TATCCCGGCG ATGACTATGA CCTGATCTGC
TATTTCGACT GCCTGCACGA CATGGGCGAT CCGGTCGGTG CGGCGAAGCA TGCGTTTGAA
TCGTTGAAGG ACGACGGCAC AGTGCTGCTG GTCGAGCCGT TTGCCAACGA CACCCTGGAC
GAAAACATCA CGCCGGTCGG GCGCTTGTTC TATGCGGCAT CGACGTTCAT TTGCACGCCG
AACTCGCTGT CCCAGGAAGT GGGCCTCGGC CTTGGTGCGC AGGCGGGCGA GTCACGCTTG
CGCAAGGTGT TTACCGAAGC CGGCTTCAAA CACTTCCGGC GGGCGACGCA GACGCCGTTC
AACCTGATTC TGGAGGCGCG CAAGTAA
 
Protein sequence
MDEARLNEFM GKLVNDMGGA AMLANVIVGE ELGLYRAMAD SQPISPETLA EKTTCNPRLV 
REWLSAHAAS GYMEHHDGKF RLPEEQALAL AKEDSPVYVA GGLGVVASFF HDKDKLVKAM
RGNGALPWGD HHPCMFTGTE RFFRPGYKGH LIAEWLPALD GVVAKLEAGA KVADIGCGHG
ASTVIMAQAY PNSRFVGFDY HAPSITVATQ RAEEGGVSSR ARFFQGTAKS YPGDDYDLIC
YFDCLHDMGD PVGAAKHAFE SLKDDGTVLL VEPFANDTLD ENITPVGRLF YAASTFICTP
NSLSQEVGLG LGAQAGESRL RKVFTEAGFK HFRRATQTPF NLILEARK