Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2016 |
Symbol | |
ID | 3716115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2298637 |
End bp | 2299773 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | glycosyl transferase family protein |
Protein accession | YP_347748 |
Protein GI | 77458243 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGAAT TCATTTTCTG GATGTGCCTG CTGCTGCCGG CGTACGCCTA TGTCGGCTAT CCACTGCTGC TGACGCTGCT GGCGCCACTG TTTCCGGCGT GGCGCCACAG CCCGGCCCCG CCGCTGAACG TCAGCATCGT CATTGCCGCC CACAATGAAG CACGGCACAT CGAACACAAG CTGCGCTCGC TGCTGTCCCA GGATTATCAG CCGGCGACCC TGCAAATCAT TCTGGCCAGC GACGGTTCCA CCGACGCCAC CGTGGCCTGC GCACACAAGG TCGTCGACCC GCGAATCACC GTGCTCGACC TGCCCCGCCA GGGCAAAGCC GCCACGCTGA ATGCCGGCGC GGCCCTGGCC ACGGGCGACA TTCTGGTGTT CACCGACGCT GATAACCAAT GGTCGCGGGA AACCCTCGGC TACCTGCTGG CGCCGCTGAG CGATCCGCAG GTCGGCGCCT GCGCCGGGCA CATGGTGATT CCGGTCACCG GTGGCGGACT GAGCATCGGC GACAGCCTTT ATCGGCACTA CGAGGGCTGG TTGCGCCGGG TCGAGAACCG TACCGGCTGC ATGGTCTCCG CCGACGGCGC CCTGCTCGCC CTGCGCCGCG AACTGTTCGA GAACGTGCCG GCCGAGGTCA ATGACGACTT TTTCATCAGC ACCTGCGCGC CAGTGAAATT CAAACGCATC GTCTACGTGC CCGAAGCGCA AGTGATCGAC CACGGCGTCG ACGAAGCGGA CAAGCAATTC CGCCGGCGCC AGCGGGTCAC GGTCGGCGGC CTGCAAAGCC TGGCGCAACG CAGTGAACTG CTTAATCCGT TCAAGCATGG GCTGTATTCG ATTGCGTTGA TCAGCCACAA GCTGATCCGC CGTCTGGCGC CGATCCTGTT GCTGCCGCTG CTGCTGAGCA ATTTCTGGCT GTGGGAAGAC CACGGTTTCT ATCGCCTGAG CCTGATCGCG CAACTGATCG GCTACGCCAT TGCGATTGCC GGTCTGCTGG ATTCGCAGCA CCGCTTGCCC AAGCCGTTCC GCCTCGCGGC GTTCCTGCTG GTGACACTGG CGGGCACGAG CATCGGCCTG TGGCAGTTCC TGCGCGGCCA GCGTTATGCC CAGTGGAACC CTGACCAAAA CCGTTGA
|
Protein sequence | MAEFIFWMCL LLPAYAYVGY PLLLTLLAPL FPAWRHSPAP PLNVSIVIAA HNEARHIEHK LRSLLSQDYQ PATLQIILAS DGSTDATVAC AHKVVDPRIT VLDLPRQGKA ATLNAGAALA TGDILVFTDA DNQWSRETLG YLLAPLSDPQ VGACAGHMVI PVTGGGLSIG DSLYRHYEGW LRRVENRTGC MVSADGALLA LRRELFENVP AEVNDDFFIS TCAPVKFKRI VYVPEAQVID HGVDEADKQF RRRQRVTVGG LQSLAQRSEL LNPFKHGLYS IALISHKLIR RLAPILLLPL LLSNFWLWED HGFYRLSLIA QLIGYAIAIA GLLDSQHRLP KPFRLAAFLL VTLAGTSIGL WQFLRGQRYA QWNPDQNR
|
| |