| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2004 |
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| Symbol | |
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| ID | 3716103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2287340 |
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| End bp | 2288776 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | two component, sigma-54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_347736 |
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| Protein GI | 77458231 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.753041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACA GCATTCTGCT GGTCGAGGAT GACGAACTGC TGGCCGAGAA TATTCAGACC
TACCTGGAGC GCAAAGACTT CGAGGTGACG GTCTGCCACT CGGCCGAGGA CGCGCTGGGG
CAACTGGAAA GCTTCATGCC GGACATCGTC CTGACCGACA ACTCGCTGCC GGGCATGAGC
GGTCACGATC TGATCCAGAA GCTGCGCATC AGCGCGCCGG ACCTGAAAGT GATCATGATG
ACCGGTTACG GCAACGTCGA AGACGCGGTG GTCGCGATGA AGGAGGGCGC CTTCCATTAC
GTCACCAAAC CGGTCGCGCT GCCGGAACTC AAACTGCTGC TGGACAAGGC CCTGGCCACC
GAACGGATGG AACGCACGCT GTCGTTCTAT CAGGAGCGCG AGGCGCAGAA ATCCGGAGTG
CAGGCGCTGA TCGGCGAATC GGCGCCTATG CTGCACCTGA AGAACACCAT CGGTCAGTTG
CTCGACGCCG AGCGGCGCAT GGCCAACGGC GATCTGCCGC CGGTTCTGGT GGAGGGCGAA
ACCGGTACCG GCAAGGAACT GGTCGCCCGC GCGCTGCATT TCGACGGCGC GCGCAGCAAA
GGCCCGTTCA TTGAATTCAA CTGCGCGTCG ATTCCGGCCA ACCTGGTGGA GTCAGAGCTG
TTCGGTCACG AGAAAGGCGC GTTCACCGAT GCCAAGGACC GCCGGGTCGG GCTGGTGGAA
GCCGCTGATG GCGGCACGCT GTTTCTCGAT GAAATCGGTG AAATGGATCT GGTGCTCCAG
GCTAAGCTGC TGAAATTGCT GGAGGATCGC ACCATTCGCC GGGTCGGCTC GGTGAAGGAG
CGCAAGGTCA ACCTGCGGGT GATCAGCGCC ACCAATTGCA ACCTTGAGCA GATGGTCCAG
CAGGGCAAGT TCCGCCGCGA TCTGTTTTTC CGGCTGCGGA TCATCTCGAT CAAGGTCCCG
CGCTTGTACG CCCGTGGCGA AGACATCCTG CTGCTGGCCC GGCACTTCCT CGCCAGCCAC
GGCAAGCGAT ATGGCAAACC GAACCTGCAC TTCAGCGATC AGGCCGAAGA GCTGCTGCTC
AGTTACACCT GGCCGGGCAA CGTGCGCGAA CTGCGCAACA TGCTCGAACA GACCGTGCTG
CTGGCGCCAA ACGACACCAT CGCCGCTCAT CAACTGAACG TGTGCATGAG CCTGTGCGAT
GAGCTGCCAC CGCAACATCA GCACGAGGTG CCGCACACGC ACTTCGAACC GCGCCCGGCG
AGCAACACCG AATCGATGAA CCTGCCGGAA GTCGAACGCG ACATGGTGCG CAAGATGCTC
GACAAGACCG ACTGGAACGT CACCAAATCG GCGCGCCTGC TGGGCCTGAG CCGCGACATG
CTGCGCTACC GCATCGAAAA GCTCGGCCTG GCGCGGCCGG ACAAGCGTCA GTGGTAA
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| Protein sequence | MEHSILLVED DELLAENIQT YLERKDFEVT VCHSAEDALG QLESFMPDIV LTDNSLPGMS
GHDLIQKLRI SAPDLKVIMM TGYGNVEDAV VAMKEGAFHY VTKPVALPEL KLLLDKALAT
ERMERTLSFY QEREAQKSGV QALIGESAPM LHLKNTIGQL LDAERRMANG DLPPVLVEGE
TGTGKELVAR ALHFDGARSK GPFIEFNCAS IPANLVESEL FGHEKGAFTD AKDRRVGLVE
AADGGTLFLD EIGEMDLVLQ AKLLKLLEDR TIRRVGSVKE RKVNLRVISA TNCNLEQMVQ
QGKFRRDLFF RLRIISIKVP RLYARGEDIL LLARHFLASH GKRYGKPNLH FSDQAEELLL
SYTWPGNVRE LRNMLEQTVL LAPNDTIAAH QLNVCMSLCD ELPPQHQHEV PHTHFEPRPA
SNTESMNLPE VERDMVRKML DKTDWNVTKS ARLLGLSRDM LRYRIEKLGL ARPDKRQW
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