Gene Pfl01_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1993 
Symbol 
ID3716131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2271699 
End bp2272559 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content60% 
IMG OID 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_347725 
Protein GI77458220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00606032 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0509044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAATTGCGCT AGGGCTGATG TTGGCAGCAT TACAAGGGTG CAGTCTGCGC 
GAGCCGATGC CGGCCGAGCA GGACACCGAT ACCCCGACCC TGACCCCCAG GGCCTCGACC
TACTACGACT TGCTGAAAAT GCCGCGACCC AAGGGCCGGC TGATGGCGGT GGTGTACGGC
TTCCGTGACC AGACCGGGCA GTACAAACCG ACCCCGGCCA GTTCGTTTTC CACCAGCGTC
ACCCAGGGCG CAGCGTCGAT GTTGATGGAC GCCATGCAGG CCAGCGGCTG GTTTGTGGTG
CTTGAGCGGG AAGGGCTGCA GAACCTGCTG ACTGAACGCA AGATCATTCG CGCTTCGCAG
AAGAAACCGA ATACGCCGGT GAACATTCAG GGTGAGCTGC CACCGTTGCA GGCGGCGAAC
ATGATGCTCG AGGGCGGGAT CATCGCTTAC GACACCAACG TGCGCAGCGG TGGGGAAGGG
GCGCGGTATC TGGGGATTGA TCTGTCCCGT GAGTATCGGG TGGATCAGGT GACGGTGAAT
TTGCGTGCGG TGGATGTGCG TAGCGGGCAG GTGCTGGCGA ATGTGATGAC CAGCAAGACG
ATTTATTCGG TGGCGCGCAG TGCGGGGATT TTCAAGTTCA TCGAGTTCAA GAAGTTGCTT
GAGGCTGAGG TCGGGTATAC GACCAATGAG CCGGCGCAGT TGTGTGTGTT GTCGGCGATT
GAGGCGGCGG TGGGGCATAT GGTGGCGCAG GGGATTGAGC GGCGGTTGTG GCAGGTGGCG
GGGGATGCTT CTACGCCTTC GCAGGATGAT GTTTTGAATC GGTACCTGAC TCAGAACAAG
GTTGACCCGG ATGCCGAGTG A
 
Protein sequence
MKKIIALGLM LAALQGCSLR EPMPAEQDTD TPTLTPRAST YYDLLKMPRP KGRLMAVVYG 
FRDQTGQYKP TPASSFSTSV TQGAASMLMD AMQASGWFVV LEREGLQNLL TERKIIRASQ
KKPNTPVNIQ GELPPLQAAN MMLEGGIIAY DTNVRSGGEG ARYLGIDLSR EYRVDQVTVN
LRAVDVRSGQ VLANVMTSKT IYSVARSAGI FKFIEFKKLL EAEVGYTTNE PAQLCVLSAI
EAAVGHMVAQ GIERRLWQVA GDASTPSQDD VLNRYLTQNK VDPDAE